| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1350 |
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| Symbol | |
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| ID | 3933797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1314804 |
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| End bp | 1315319 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637903700 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_509292 |
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| Protein GI | 89053841 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.810937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACT TTCTCAGTCA CCTGAACAAA AACGCCGAAC GTTGGCTGCT TTTGGTGTTC
TACGTCATGC TTGTGGGGAC CATGTTTATC GAGGTCGTGC GGCGCGAGGT CTTTGCCTAT
TCCTCCATTT GGGGGGAGGA GATGGTGCGC TATTCCTTCA TCTACCTGGC CTGGGTCGGT
GCGGCCTCGG CGGTGAAAGA GCGTGGGCAC ATCCGGATCG ACGTGATCCT GAATTATGTA
CCGCCCACCG TGAAAACGCT GATCTACATC TTCGGCGACA TCATCATGTT TGTCGTGGCC
TGTATCGCGC TCTATTGGTC ATGGGAGGCG GTGCATGTGT CGTGGAAATT CGGCTCCGTG
ACCCATGGCT TGCGCATCAG CCAAACCTTC TTCCTGTTCG CCGTGCCGTT TGGTTTTGCC
CTGGTCATCC TGAGGCTCAT CCAATCCTTC CTGCGCGATG TCTCCGACCT TCGTAACGGC
CGTGCCGTCT ACGAAGGCGA CAAGCTGTTC GACTGA
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| Protein sequence | MSNFLSHLNK NAERWLLLVF YVMLVGTMFI EVVRREVFAY SSIWGEEMVR YSFIYLAWVG
AASAVKERGH IRIDVILNYV PPTVKTLIYI FGDIIMFVVA CIALYWSWEA VHVSWKFGSV
THGLRISQTF FLFAVPFGFA LVILRLIQSF LRDVSDLRNG RAVYEGDKLF D
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