5 homologs were found in PanDaTox collection
for query gene Pput_3413 on replicon NC_009512
Organism: Pseudomonas putida F1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009512  Pput_3413  hypothetical protein  100 
 
 
173 aa  352  1e-96  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1919  hypothetical protein  90 
 
 
174 aa  313  6e-85  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3458  hypothetical protein  69.15 
 
 
120 aa  115  1.9999999999999998e-25  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.00000000155736 
 
 
-
 
NC_007005  Psyr_2823  hypothetical protein  57.65 
 
 
127 aa  91.7  5e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.43309  normal  0.768585 
 
 
-
 
NC_004578  PSPTO_2391  hypothetical protein  47.87 
 
 
106 aa  84.3  7e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00279788  n/a   
 
 
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