6 homologs were found in PanDaTox collection
for query gene PputGB1_3458 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010322  PputGB1_3458  hypothetical protein  100 
 
 
120 aa  236  1e-61  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.00000000155736 
 
 
-
 
NC_009512  Pput_3413  hypothetical protein  69.15 
 
 
173 aa  115  9.999999999999999e-26  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1919  hypothetical protein  62.77 
 
 
174 aa  104  3e-22  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2823  hypothetical protein  50.96 
 
 
127 aa  98.2  3e-20  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.43309  normal  0.768585 
 
 
-
 
NC_004578  PSPTO_2391  hypothetical protein  59.46 
 
 
106 aa  81.3  0.000000000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00279788  n/a   
 
 
-
 
NC_007005  Psyr_2851  hypothetical protein  34.09 
 
 
117 aa  46.2  0.0001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0594497 
 
 
-
 
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