Gene Pput_3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3413 
Symbol 
ID5193408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3821419 
End bp3821940 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content63% 
IMG OID640587861 
Producthypothetical protein 
Protein accessionYP_001268723 
Protein GI148548621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGT CACCCAAGGA GCGCGACGTG AAGCGCCGCG CCAAAGCCGC ACGGTTGCAG 
GAAGAAGACC TGCGCTTGAA GGTTCGACCA GGGACTAAAC AGGCCCTGCT TGAGCTGATG
GAGTGGGCCG GGATCGAGGA ACAGGGCGAG GCGATGACGC TGATGATTCA TCACATCGAA
GCGCTTGGGT ATCACGCACT GTTCAGGATC GCGCGCCACG AAATCGAAGC TCACCGATCT
GTGGCGCGGA CTGAGCCGCT GCGGCTGTCA GCCAGGAAGC GAACCAGCCA GCACCTGCGC
GCTATCTGCG GCTGGGTCGA CGCCACCTAC AGCCAAATGA TCGAGGCGCT GATCCACGGT
ATCCACGCCC TTGGCCGGCT GCACGCGGCG AAGTTTCTCA CCCCTCCGCG GCACGAGATC
AGCATCTCGC CGCGCCTGGC CCTGGCCTTC GACCGGAAGA GCATGCTGAT GATTCAGCAG
GATCCGGGGG ACGAAGTTGT CAGGCCTTGC GACAACTGCT AG
 
Protein sequence
MAMSPKERDV KRRAKAARLQ EEDLRLKVRP GTKQALLELM EWAGIEEQGE AMTLMIHHIE 
ALGYHALFRI ARHEIEAHRS VARTEPLRLS ARKRTSQHLR AICGWVDATY SQMIEALIHG
IHALGRLHAA KFLTPPRHEI SISPRLALAF DRKSMLMIQQ DPGDEVVRPC DNC