| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3458 |
|---|
| Symbol | |
|---|
| ID | 5871244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 3870426 |
|---|
| End bp | 3870788 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641548574 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001669685 |
|---|
| Protein GI | 167034454 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00000000155736 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATGT CACCCAAGGA ACGCGACGAG AAGCGCCGCG CCAAAGCCGC ACGGTTGCAG
GAAGAAGACC TGCGTTTGAA GGTTCGACCA GGGACTAAAC AGGCCCTGCT GGAACTGATG
GAGTGGGCCG GGATCGAGGA GCAGGGCGAG GCGATGACTG TAATGATCCA TCGCCTGCAT
GAGCTCACCC GCGACGAAGC GGTGAAGCTG CTAACACCTC CGCGCCACAA AATCGAACTT
AGCGTAAACG TGGTGCGCAA GCTCGACCAG TTCAGGCTGA GCCGCGAGCT GCGCGCGCCG
GGCCTTGAGC TCGGCGACGA CCCGGACGAT ACCGGGCTGA TCCTAGTCGC AGAACGGGCC
TGA
|
|---|
| Protein sequence | MAMSPKERDE KRRAKAARLQ EEDLRLKVRP GTKQALLELM EWAGIEEQGE AMTVMIHRLH
ELTRDEAVKL LTPPRHKIEL SVNVVRKLDQ FRLSRELRAP GLELGDDPDD TGLILVAERA
|
|---|
| |