8 homologs were found in PanDaTox collection
for query gene Ppha_1940 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_1940  hypothetical protein  100 
 
 
202 aa  419  1e-116  Pelodictyon phaeoclathratiforme BU-1  Bacteria  unclonable  0.0000000736005  n/a   
 
 
-
 
NC_008639  Cpha266_0897  hypothetical protein  71.29 
 
 
202 aa  303  8.000000000000001e-82  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1939  glycoside hydrolase family 16  79.37 
 
 
566 aa  116  3e-25  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.000600804  n/a   
 
 
-
 
NC_008639  Cpha266_0902  hypothetical protein  73.02 
 
 
586 aa  113  2.0000000000000002e-24  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.530608  n/a   
 
 
-
 
NC_011060  Ppha_1946  hypothetical protein  74.6 
 
 
306 aa  111  7.000000000000001e-24  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00997361  n/a   
 
 
-
 
NC_008639  Cpha266_0898  hypothetical protein  68.25 
 
 
313 aa  103  2e-21  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1942  protein of unknown function DUF323  75 
 
 
517 aa  98.2  7e-20  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00637394  n/a   
 
 
-
 
NC_007348  Reut_B3506  ATP-binding region, ATPase-like  26.4 
 
 
496 aa  44.7  0.0009  Ralstonia eutropha JMP134  Bacteria  normal  0.0457672  n/a   
 
 
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