10 homologs were found in PanDaTox collection
for query gene Ppha_0890 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_0890  hypothetical protein  100 
 
 
218 aa  458  9.999999999999999e-129  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0784  hypothetical protein  89.45 
 
 
231 aa  417  1e-116  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2921  hypothetical protein  52.75 
 
 
210 aa  238  5.999999999999999e-62  Geobacter uraniireducens Rf4  Bacteria  normal  0.525203  n/a   
 
 
-
 
NC_009438  Sputcn32_3982  hypothetical protein  51.89 
 
 
209 aa  224  9e-58  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_1884  hypothetical protein  49.28 
 
 
217 aa  201  6e-51  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1185  hypothetical protein  25.95 
 
 
389 aa  53.5  0.000002  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0012154  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1184  hypothetical protein  27.88 
 
 
323 aa  48.5  0.00009  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.000000411873  n/a   
 
 
-
 
NC_013757  Gobs_1511  hypothetical protein  25.64 
 
 
347 aa  47.4  0.0002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2826  hypothetical protein  28.42 
 
 
342 aa  42.4  0.005  Shewanella baltica OS223  Bacteria  normal  0.551029  normal 
 
 
-
 
NC_008699  Noca_0051  hypothetical protein  34.48 
 
 
280 aa  41.6  0.008  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
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