8 homologs were found in PanDaTox collection
for query gene Pnec_R0013 on replicon NC_010531
Organism: Polynucleobacter necessarius subsp. necessarius STIR1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009379  Pnuc_R0013  tRNA-Cys  100 
 
 		 74 bp  147  4.0000000000000006e-34  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  hitchhiker  0.00000000476816  n/a   
 
 
-
 
NC_010531  Pnec_R0013  tRNA-Cys  100 
 
 		 74 bp  147  4.0000000000000006e-34  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_R0002  tRNA-Cys  89.8 
 
 		 74 bp  58  0.0000003  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_R0027  tRNA-Cys  87.27 
 
 		 72 bp  46.1  0.001  Frankia sp. CcI3  Bacteria  normal  0.258268  normal  1 
 
 
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NC_008578  Acel_R0040  tRNA-Cys  87.27 
 
 		 72 bp  46.1  0.001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.29176  normal  0.285834 
 
 
-
 
NC_009921  Franean1_R0036  tRNA-Cys  87.27 
 
 		 72 bp  46.1  0.001  Frankia sp. EAN1pec  Bacteria  normal  0.601784  normal  0.0254396 
 
 
-
 
NC_008599  CFF8240_1787  tRNA-Cys  91.18 
 
 		 74 bp  44.1  0.004  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.232461  n/a   
 
 
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NC_009802  CCC13826_2329  tRNA-Cys  91.18 
 
 		 74 bp  44.1  0.004  Campylobacter concisus 13826  Bacteria  hitchhiker  0.00581187  n/a   
 
 
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