6 homologs were found in PanDaTox collection
for query gene Pmen_3203 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_3203  hypothetical protein  100 
 
 
190 aa  385  1e-106  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0185892 
 
 
-
 
NC_011726  PCC8801_0367  Hemolysin-type calcium-binding region  24.71 
 
 
726 aa  66.2  0.0000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_6122  hypothetical protein  28.99 
 
 
132 aa  55.8  0.0000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.800704  normal 
 
 
-
 
NC_012560  Avin_35800  hypothetical protein  23.47 
 
 
287 aa  48.1  0.00007  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3764  hypothetical protein  32.73 
 
 
359 aa  41.6  0.007  Sphingomonas wittichii RW1  Bacteria  normal  0.0186816  normal 
 
 
-
 
NC_013061  Phep_2428  protein of unknown function DUF1486  22.34 
 
 
141 aa  41.6  0.008  Pedobacter heparinus DSM 2366  Bacteria  decreased coverage  0.000117407  normal 
 
 
-
 
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