12 homologs were found in PanDaTox collection
for query gene Pmen_1547 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009439  Pmen_1547  hypothetical protein  100 
 
 		 49 aa  103  1e-21  Pseudomonas mendocina ymp  Bacteria  normal  0.539405  normal  0.492762 
 
 
-
 
NC_008463  PA14_21560  hypothetical protein  74.47 
 
 		 79 aa  77  0.00000000000008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_1835  hypothetical protein  74.47 
 
 		 79 aa  75.5  0.0000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_1423  transmembrane transcriptional regulator (anti-sigma-factor)  71.74 
 
 		 78 aa  72.8  0.000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.54049 
 
 
-
 
NC_009675  Anae109_1555  putative transmembrane anti-sigma factor  45.83 
 
 		 81 aa  54.7  0.0000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.0444542 
 
 
-
 
NC_010511  M446_3934  hypothetical protein  45.45 
 
 		 84 aa  43.1  0.001  Methylobacterium sp. 4-46  Bacteria  normal  0.362853  normal  0.012309 
 
 
-
 
NC_009675  Anae109_3621  putative transmembrane anti-sigma factor  40.91 
 
 		 89 aa  42.4  0.002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.0680768 
 
 
-
 
NC_003910  CPS_0795  hypothetical protein  34.04 
 
 		 79 aa  42  0.003  Colwellia psychrerythraea 34H  Bacteria  normal  0.753726  n/a   
 
 
-
 
NC_007644  Moth_2363  putative transmembrane transcriptional regulator (anti-sigma factor)  40 
 
 		 376 aa  41.2  0.004  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.824355  hitchhiker  0.000839626 
 
 
-
 
NC_008726  Mvan_0781  putative transmembrane anti-sigma factor  41.3 
 
 		 80 aa  41.2  0.005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.26377  normal  1 
 
 
-
 
NC_011894  Mnod_3637  putative transmembrane anti-sigma factor  31.91 
 
 		 84 aa  41.2  0.005  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.60771  n/a   
 
 
-
 
NC_013501  Rmar_2225  hypothetical protein  41.3 
 
 		 91 aa  41.2  0.005  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
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