7 homologs were found in PanDaTox collection
for query gene Plav_3406 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009719  Plav_3406  hypothetical protein  100 
 
 
259 aa  538  9.999999999999999e-153  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.101683  normal  0.312255 
 
 
-
 
NC_009441  Fjoh_3686  hypothetical protein  37.79 
 
 
231 aa  156  3e-37  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0958044  n/a   
 
 
-
 
NC_012855  Rpic12D_5067  hypothetical protein  31.47 
 
 
279 aa  80.9  0.00000000000002  Ralstonia pickettii 12D  Bacteria  normal  normal  0.554707 
 
 
-
 
NC_008530  LGAS_1357  competence protein  31.03 
 
 
312 aa  53.5  0.000003  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000492199  normal  0.0337065 
 
 
-
 
NC_012793  GWCH70_0767  Competence CoiA family protein  28.87 
 
 
412 aa  50.4  0.00003  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_1161  competence protein  33 
 
 
362 aa  42.4  0.007  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0908  competence CoiA family protein  30.17 
 
 
411 aa  42.4  0.008  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
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