Gene Rpic12D_5067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5067 
Symbol 
ID8017356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp358030 
End bp358869 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content59% 
IMG OID644828755 
Producthypothetical protein 
Protein accessionYP_002979955 
Protein GI241589930 
COG category[R] General function prediction only 
COG ID[COG4469] Competence protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.554707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGA TCGGCCAGGC TTCCAAACTG TGGCCCACCC CCGCAGCGTC GCGGCATGGA 
CATGTCGCGA ATACCCATCA CAAGTTGTCG GCTGGAGCAG GGTGGGCGCG CTACATTGGT
CACAACCGCC ATCGCGCCGC TGGCCACAAA GCGCCGTCAT CATTGAATTG GAGGGTAGGG
GTGCCGCTCA CGTGCTTGGA TGCGGACGGA ACCATCGTGT TCGCGCACCA CCTCACACGA
GATGAGTTGG AAGCCTTACG CAACAGTCAA AAGATGCTCT CGTCATTGCA CTTCGCCTGT
TGCACGGCAC GAGTCGGTTT GCGCGTGTCG AAGAACGGTC TGAACCACTT CTATCATCTC
TCCGACGCTC GCTCCTGCCC ATACGCAGAG GAAACGGAAG CGCACCTTAG CCTGAAGGTG
GCCGCTATGG AGGCAGCTCG TCGAGCGGGT TGGCAAGCGG ATTGTGAGGT ATCAGGCGGC
TTCGACGATT CACAGCAGTG GAGGGCAGAT GTTCTCGCGT GGAAAGGCGC AGTGAGGATC
GCTTTTGAGG TTCAGATCTC GAACGCAACG TGGGCACAAG TTGTTGCCAG ACAAGCGCGA
TATCGTGCCG CGGGAGTTCG CGGCCTTTGG CTGCTGGGAC AGGACAGCTA CCAAGTCTGC
AAAGAAGTGC CGGCATTCCA AGTTCGCGAT GACGGGGAGG GCGACTGGAT GGTCAGGATC
AGTCCGCCGA AGGAGCCCCA CAATGTCTGC TTGCGCGCCT TCAAAGGCAA CTGGCTCGCC
CTCGAATCAT TCATCCAAGC TGCACTGACC AAAAAACCTG GTCTGGGCCC CGGTGCTTGA
 
Protein sequence
MAQIGQASKL WPTPAASRHG HVANTHHKLS AGAGWARYIG HNRHRAAGHK APSSLNWRVG 
VPLTCLDADG TIVFAHHLTR DELEALRNSQ KMLSSLHFAC CTARVGLRVS KNGLNHFYHL
SDARSCPYAE ETEAHLSLKV AAMEAARRAG WQADCEVSGG FDDSQQWRAD VLAWKGAVRI
AFEVQISNAT WAQVVARQAR YRAAGVRGLW LLGQDSYQVC KEVPAFQVRD DGEGDWMVRI
SPPKEPHNVC LRAFKGNWLA LESFIQAALT KKPGLGPGA