11 homologs were found in PanDaTox collection
for query gene Pden_0257 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008686  Pden_0257  hypothetical protein  100 
 
 
116 aa  239  1e-62  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2159  hypothetical protein  43.33 
 
 
126 aa  95.5  2e-19  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0189449 
 
 
-
 
NC_013174  Jden_2299  hypothetical protein  43.33 
 
 
126 aa  95.5  2e-19  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.436132 
 
 
-
 
NC_009428  Rsph17025_1727  hypothetical protein  48.28 
 
 
114 aa  95.1  3e-19  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.458861  normal 
 
 
-
 
NC_009720  Xaut_3599  hypothetical protein  41.96 
 
 
117 aa  80.1  0.00000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.962186  normal 
 
 
-
 
NC_007494  RSP_3793  hypothetical protein  44.55 
 
 
102 aa  71.2  0.000000000004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.118675  n/a   
 
 
-
 
NC_009636  Smed_1677  hypothetical protein  40.5 
 
 
123 aa  71.2  0.000000000004  Sinorhizobium medicae WSM419  Bacteria  normal  0.334245  normal  0.188357 
 
 
-
 
NC_007777  Francci3_0278  hypothetical protein  41.18 
 
 
152 aa  62.4  0.000000002  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7412  hypothetical protein  39.8 
 
 
113 aa  53.5  0.0000009  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.2512  normal 
 
 
-
 
NC_011758  Mchl_5565  hypothetical protein  37.07 
 
 
104 aa  48.1  0.00004  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.104355  normal  0.123926 
 
 
-
 
NC_013930  TK90_2749  hypothetical protein  31.11 
 
 
92 aa  41.2  0.005  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.448034 
 
 
-
 
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