8 homologs were found in PanDaTox collection
for query gene PGt32 on replicon NC_002950
Organism: Porphyromonas gingivalis W83



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002950  PGt32  tRNA-Arg  100 
 
 
75 bp  149  1.0000000000000001e-34  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_008255  CHU_tArg04  tRNA-Arg  87.5 
 
 
78 bp  63.9  0.000000005  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_R0010  tRNA-Arg  87.72 
 
 
75 bp  58  0.0000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.523644 
 
 
-
 
NC_013061  Phep_R0001  tRNA-Arg  87.72 
 
 
72 bp  58  0.0000003  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_010830  Aasi_R0030  tRNA-Arg  87.27 
 
 
72 bp  54  0.000005  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.143147 
 
 
-
 
NC_013132  Cpin_R0018  tRNA-Arg  94.12 
 
 
75 bp  52  0.00002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.0963196 
 
 
-
 
NC_013037  Dfer_R0007  tRNA-Arg  96.55 
 
 
75 bp  50.1  0.00007  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.414497  normal  0.369235 
 
 
-
 
NC_013162  Coch_R0030  tRNA-Arg  91.43 
 
 
72 bp  46.1  0.001  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
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