10 homologs were found in PanDaTox collection
for query gene PG1535 on replicon NC_002950
Organism: Porphyromonas gingivalis W83



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002950  PG1535  transcriptional regulator, putative  100 
 
 
113 aa  231  3e-60  Porphyromonas gingivalis W83  Bacteria  n/a    hitchhiker  0.00452655 
 
 
-
 
NC_013757  Gobs_3103  transcriptional regulator, XRE family  37.5 
 
 
503 aa  45.8  0.0002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.597911  n/a   
 
 
-
 
NC_013235  Namu_4666  transcriptional regulator, XRE family  33.33 
 
 
197 aa  42.7  0.002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.223091  normal 
 
 
-
 
NC_008686  Pden_0477  XRE family transcriptional regulator  29 
 
 
204 aa  42  0.003  Paracoccus denitrificans PD1222  Bacteria  normal  0.566181  normal 
 
 
-
 
NC_008146  Mmcs_3341  XRE family transcriptional regulator  27.54 
 
 
193 aa  41.2  0.004  Mycobacterium sp. MCS  Bacteria  normal  0.272722  n/a   
 
 
-
 
NC_008705  Mkms_3403  XRE family transcriptional regulator  27.54 
 
 
193 aa  41.2  0.004  Mycobacterium sp. KMS  Bacteria  normal  normal  0.234277 
 
 
-
 
NC_009077  Mjls_3352  XRE family transcriptional regulator  27.54 
 
 
193 aa  41.2  0.004  Mycobacterium sp. JLS  Bacteria  normal  normal  0.236659 
 
 
-
 
NC_009953  Sare_2429  XRE family transcriptional regulator  37.5 
 
 
191 aa  41.2  0.005  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0848952 
 
 
-
 
NC_009253  Dred_0917  XRE family transcriptional regulator  34.92 
 
 
78 aa  40.8  0.006  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_06790  hypothetical protein  32.32 
 
 
187 aa  40.8  0.007  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.171424  n/a   
 
 
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