| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_3103 |
|---|
| Symbol | |
|---|
| ID | 8754779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 3256045 |
|---|
| End bp | 3257556 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003410081 |
|---|
| Protein GI | 284991527 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.597911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCA TCGGCATGCT CGTCCGCGAC GCCCGGCGGC ACCGCGGGCT CACCCAGCAG
CAGCTCGCCG AGCGGCTCGG CACCAGCCAG AGCGCCGTCG CCCGCATCGA GCAGGGCGGG
CAGAACCTCA CCCTCGAACT GCTCGGCCGG CTCTCCGAGG CGCTCGAGCG TGAGCTGTTC
AGCGTCGGCC CGTCCGGCCC CACCCACCTG CGGGTCTCCG GCGGCGTGCC GCTGCGCGGC
AGCGTGACCG TGAAGTCCTC CAAGAACGCC GCCGTCGCGC TGCTGTGCGC CGCCCTGCTC
AACCGCGGCC GGACGACGCT GCGCAACGTG GCCCGGATCG TGGAGGTCGA GCGGATCCTC
GACGTGCTGC GCTCGATCGG CGTCTCGGCG ACCTGGGACA CGGCCGGCCG CGACCTCACC
CTCGTCGTCC CCGAGCAGCT GGACCTCGCC GGCATCGACG CCGACGCCGC CCGCCGGACC
CGCAGCATCA TCATGTTCCT CGGCCCGCTG CTGCACCGGG CGCCGTCGTT CGACCTGCCC
TACGCCGGCG GTTGCGACCT GGGCACCCGC ACCGTCGAGC CGCACATGAT CGCGCTGCGC
CCCTTCGGGC TGGAGGTCGA GGCCCGCGGC GGCAGCTACC ACGCCGCGGT CACCGCGCCG
GGCACGGCGG ACCGCACCAT CGTGCTGACC GAGCGGGGCG ACACCGTCAC CGAGAACGCG
CTGCTGGCCG CGGCCCGCAC CGACGGGACG ACGACCATCC GCAACGCCAG TTCCAACTAC
ATGGTCCAGG ACCTCTGCCT GTACCTGCAG CTGCTCGGCG TCGGCGTCGA GGGGCTCGGC
ACCACCACCC TCGTCGTGCA CGGGAAGCCG GTGCTCGACG CCGACGTCGA CTACACGATC
AGTGAGGACC CGGTCGAGGC GATGAGCCTG CTGACCGCCG GCATCGTCAC CGACTCGGAG
CTGACCGTGT GCCGGGCGCC GATCGAGTTC CTCGAGGTGG AGCTGGCCAC CCTCGCCGAG
ATGGGGCTGC GCTACCGCCT GTCGCCGGAG TACCTGGCCG ACAACGGGCA CACCCGGCTG
GTCGACGTCA CCATCTCCCC GTCGGAGCTC AAGGCGCTGA TCGACAAGAT CCACCCGATG
CCGTTCCCGG GCCTCAACAT CGACAACCTG CCGTTCTTCG CCGTCATCGC GGCCGCGGCA
ACCGGCTCGA CGCTGATCCA CGACTGGGTC TACGACAACC GGGCCATCCA CCTGTCCGAC
CTGACCCGGC TCGGTGCCGA CGTCCGGCTG CTCGACCCGC ACCGGGTGCT GGTGACCGGC
CCGACCCACT GGTCCAGCGC CGAGGTGGTC TGCCCGCCGG CGCTGCGCCC GGCGGTGTGC
ATCCTGCTGG CGATGCTCGC GGCCAAGGGG ACGTCGGTGC TGCGCAACGT CGACATCATC
GCCCGCGGCT ACGAGCAGCT CTACGAGCGG CTGGTCGAGA TGGGCGCCCG CATCGAGGTC
TTCCACGATT GA
|
|---|
| Protein sequence | MQRIGMLVRD ARRHRGLTQQ QLAERLGTSQ SAVARIEQGG QNLTLELLGR LSEALERELF
SVGPSGPTHL RVSGGVPLRG SVTVKSSKNA AVALLCAALL NRGRTTLRNV ARIVEVERIL
DVLRSIGVSA TWDTAGRDLT LVVPEQLDLA GIDADAARRT RSIIMFLGPL LHRAPSFDLP
YAGGCDLGTR TVEPHMIALR PFGLEVEARG GSYHAAVTAP GTADRTIVLT ERGDTVTENA
LLAAARTDGT TTIRNASSNY MVQDLCLYLQ LLGVGVEGLG TTTLVVHGKP VLDADVDYTI
SEDPVEAMSL LTAGIVTDSE LTVCRAPIEF LEVELATLAE MGLRYRLSPE YLADNGHTRL
VDVTISPSEL KALIDKIHPM PFPGLNIDNL PFFAVIAAAA TGSTLIHDWV YDNRAIHLSD
LTRLGADVRL LDPHRVLVTG PTHWSSAEVV CPPALRPAVC ILLAMLAAKG TSVLRNVDII
ARGYEQLYER LVEMGARIEV FHD
|
|---|
| |