5 homologs were found in PanDaTox collection
for query gene PC1_1438 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012917  PC1_1438  hypothetical protein  100 
 
 
140 aa  294  2e-79  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2438  hypothetical protein  50.41 
 
 
144 aa  125  2.0000000000000002e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1812  hypothetical protein  40.85 
 
 
138 aa  103  1e-21  Ralstonia solanacearum GMI1000  Bacteria  normal  0.203757  normal 
 
 
-
 
NC_010511  M446_0156  hypothetical protein  37.1 
 
 
138 aa  90.1  9e-18  Methylobacterium sp. 4-46  Bacteria  normal  0.099038  normal 
 
 
-
 
NC_007925  RPC_3030  hypothetical protein  38.02 
 
 
132 aa  85.9  2e-16  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.921397  normal 
 
 
-
 
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