10 homologs were found in PanDaTox collection
for query gene Noc_A0038 on replicon NC_007483
Organism: Nitrosococcus oceani ATCC 19707



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007483  Noc_A0038  XRE family transcriptional regulator  100 
 
 		 111 aa  231  3e-60  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007617  Nmul_D2824  XRE family transcriptional regulator  52.94 
 
 		 111 aa  114  5e-25  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.829687  n/a   
 
 
-
 
NC_009952  Dshi_0407  transcriptional regulator  54.12 
 
 		 108 aa  97.1  8e-20  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007406  Nwi_1263  XRE family transcriptional regulator  29.41 
 
 		 117 aa  48.1  0.00004  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.197496  normal  0.35007 
 
 
-
 
NC_009012  Cthe_1745  XRE family transcriptional regulator  32.91 
 
 		 126 aa  45.1  0.0003  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00000375519  n/a   
 
 
-
 
NC_007406  Nwi_0826  XRE family transcriptional regulator  29.49 
 
 		 96 aa  42.4  0.002  Nitrobacter winogradskyi Nb-255  Bacteria  hitchhiker  0.000131659  unclonable  0.000000470251 
 
 
-
 
NC_009338  Mflv_2926  Fis family transcriptional regulator  39.47 
 
 		 192 aa  42.4  0.002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.678483  normal  0.125952 
 
 
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NC_008312  Tery_2752  XRE family transcriptional regulator  29.35 
 
 		 113 aa  41.6  0.004  Trichodesmium erythraeum IMS101  Bacteria  normal  0.272342  normal  1 
 
 
-
 
NC_013522  Taci_0594  transcriptional regulator, XRE family  30.77 
 
 		 117 aa  40.8  0.007  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
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NC_007644  Moth_0278  XRE family transcriptional regulator  38.81 
 
 		 128 aa  40.4  0.008  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000672654  normal  0.646275 
 
 
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