6 homologs were found in PanDaTox collection
for query gene Noc_0090 on replicon NC_007484
Organism: Nitrosococcus oceani ATCC 19707



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007484  Noc_0090  hypothetical protein  100 
 
 
121 aa  249  1e-65  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_1738  PilT protein domain protein  46.59 
 
 
130 aa  80.9  0.000000000000005  Prosthecochloris aestuarii DSM 271  Bacteria  decreased coverage  0.0000240428  normal  0.135442 
 
 
-
 
NC_009943  Dole_1760  PilT domain-containing protein  45.78 
 
 
130 aa  75.9  0.0000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0930  PilT domain-containing protein  38.83 
 
 
132 aa  73.9  0.0000000000006  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1169  PilT domain-containing protein  44.58 
 
 
132 aa  72.4  0.000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.324472 
 
 
-
 
NC_007514  Cag_0450  hypothetical protein  38.46 
 
 
132 aa  62.8  0.000000001  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
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