8 homologs were found in PanDaTox collection
for query gene Nham_4173 on replicon NC_007959
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007959  Nham_4083    98.06 
 
 
531 bp  841    Nitrobacter hamburgensis X14  Bacteria  normal  0.366289  n/a   
 
 
-
 
NC_007959  Nham_4086  hypothetical protein  96.84 
 
 
624 bp  819    Nitrobacter hamburgensis X14  Bacteria  normal  0.396271  n/a   
 
 
-
 
NC_007959  Nham_4173    100 
 
 
928 bp  1840    Nitrobacter hamburgensis X14  Bacteria  normal  0.60996  n/a   
 
 
-
 
NC_007964  Nham_0723    96.65 
 
 
698 bp  712    Nitrobacter hamburgensis X14  Bacteria  normal  0.405299  n/a   
 
 
-
 
NC_007959  Nham_4124  hypothetical protein  95 
 
 
537 bp  626  1e-177  Nitrobacter hamburgensis X14  Bacteria  normal  0.693301  n/a   
 
 
-
 
NC_007964  Nham_2748  transposase, IS4  82.39 
 
 
936 bp  206  8e-51  Nitrobacter hamburgensis X14  Bacteria  normal  0.327226  n/a   
 
 
-
 
NC_011365  Gdia_0655  transposase IS4 family protein  88.89 
 
 
936 bp  89.7  0.000000000000001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.927973  normal  0.11164 
 
 
-
 
NC_010172  Mext_3538  hypothetical protein  100 
 
 
753 bp  50.1  0.001  Methylobacterium extorquens PA1  Bacteria  normal  0.668119  normal 
 
 
-
 
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