Gene Nham_4086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4086 
Symbol 
ID4025623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007959 
Strand- 
Start bp50075 
End bp50698 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content60% 
IMG OID637964663 
Producthypothetical protein 
Protein accessionYP_571571 
Protein GI92109283 
COG category[L] Replication, recombination and repair 
COG ID[COG3039] Transposase and inactivated derivatives, IS5 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.396271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCGCC GTCGGATTGG TCAGGAGACA TTTTCATTTT CGGCTGCGGG TTACCGCCCG 
CGCTCGTCGC TGGATGAGCT TTCGAACCTG ATCGATTGGA CGGCGATCGA GCGCCATGTG 
AGCTTAATTT CCTGCGCGGC CAAGGGCGAG CCGGCGTGGC CGCCTCTCGC GTTGTTCAAG 
GCGATGCTGC TGGCAGTCTG GTACGATTTG TCTGATGTGA AGCTCGCCGA AGCGCTGGAC 
GATCGAGCTT CCTTTCGGCG GTTCTGCGGG TTTTCAGCTT CGGAGCCAAC GCCCGAGCGC 
ACGGCCTTCG TTCGTTTCCG CAAGGCCCTT GTAGATCATA AACTGGACAA GCCCCTGTTC 
GAGGCGATCA CCGGCCAATT GAAGGCCAAA GCGATCCGGG TCAAGACCGG CACGCTTGTC 
GATGCGACGA TCATCGCATC GGCCAGCGAA GATGATGGCG AGGCGCATTG GGTCACGTGT 
GGACGGCGCC CTGGCAAGAA CTTTCTGACG TTTTGCAGCA TTGGTCGGGT GCGGTCACGT 
GTCCGGCCTG TTGATGCGGC AGGTGTGGCC GCTGGCCCTA ATGCTCTGCG CGGATCGAGT 
CCCAAACAAA CTCACGCACT TTAG
 
Protein sequence
MGRRRIGQET FSFSAAGYRP RSSLDELSNL IDWTAIERHV SLISCAAKGE PAWPPLALFK 
AMLLAVWYDL SDVKLAEALD DRASFRRFCG FSASEPTPER TAFVRFRKAL VDHKLDKPLF 
EAITGQLKAK AIRVKTGTLV DATIIASASE DDGEAHWVTC GRRPGKNFLT FCSIGRVRSR 
VRPVDAAGVA AGPNALRGSS PKQTHAL