10 homologs were found in PanDaTox collection
for query gene Nham_2483 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_2483  hypothetical protein  100 
 
 
137 aa  277  3e-74  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3985  hypothetical protein  43.61 
 
 
138 aa  110  6e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010721  Mpop_5448  hypothetical protein  31.16 
 
 
136 aa  69.7  0.00000000001  Methylobacterium populi BJ001  Bacteria  n/a    n/a   
 
 
-
 
NC_007406  Nwi_1476  hypothetical protein  31.43 
 
 
144 aa  68.2  0.00000000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.511382 
 
 
-
 
NC_009049  Rsph17029_0284  hypothetical protein  36.96 
 
 
137 aa  67.4  0.00000000006  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_1620  hypothetical protein  31.43 
 
 
144 aa  67  0.00000000008  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.616649  normal  0.259458 
 
 
-
 
NC_008254  Meso_1887  hypothetical protein  32.86 
 
 
139 aa  64.7  0.0000000004  Chelativorans sp. BNC1  Bacteria  normal  0.526852  n/a   
 
 
-
 
NC_009428  Rsph17025_1367  hypothetical protein  32.12 
 
 
137 aa  59.3  0.00000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.3644 
 
 
-
 
NC_011989  Avi_0868  hypothetical protein  28.36 
 
 
305 aa  52.4  0.000002  Agrobacterium vitis S4  Bacteria  normal  0.0683632  n/a   
 
 
-
 
NC_007493  RSP_6047  hypothetical protein  24.31 
 
 
138 aa  46.6  0.0001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
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