6 homologs were found in PanDaTox collection
for query gene Nham_1371 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_1371  sigma-24 (FecI-like)  100 
 
 
192 aa  396  1e-109  Nitrobacter hamburgensis X14  Bacteria  normal  0.117762  n/a   
 
 
-
 
NC_007490  RSP_4245  hypothetical protein  38.46 
 
 
189 aa  115  3e-25  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0121178  n/a   
 
 
-
 
NC_009485  BBta_4957  hypothetical protein  30.07 
 
 
226 aa  53.1  0.000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.208491  normal 
 
 
-
 
NC_008060  Bcen_2880  hypothetical protein  27.93 
 
 
193 aa  48.9  0.00004  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0227  hypothetical protein  27.93 
 
 
193 aa  48.9  0.00004  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008761  Pnap_4789  hypothetical protein  23.39 
 
 
174 aa  41.6  0.007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
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