Gene Bcen2424_0227 details

Gene Information

• Locus tag: Bcen2424_0227
• ID: 4449169
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: +
• Start bp: 264002
• End bp: 264583
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 639692235
• Product: hypothetical protein
• Protein accession: YP_833874
• Protein GI: 116688251
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGATA CCGTGGAGAA CGACAGTCGG CTGAGCAAAC GCGAGGTCGA GGAGGAGTTG 
CAGAAGCTTA GCGAAGCTGA CTGGACGCGG GCGGAGATTT ATGCCGACTT CTTGTCGAGA 
AGCCTCGCCG GGTGCGACGG CAACGACTTA CTGCAAATGG CGATGGAAAA GTTTCTCAAC 
ATGCGCCGCA GGTGGCCGAG GGGCCTCGAA CCGCTCAAGG CCTTGTTCGG CGCGATGAGG 
AGCATTTCTT CGAATGAGCT GAAGAAAGAG ACGAACGGTC CAATCGATAC GTTCGCGGTC 
GTATCGACGA CCGACGAGTC TCCCGACGAG GGGCAGGTCC AGCCGTACGC GGTCGCAACG 
ACTCTGGAGA CCCCGGAAGA CGTGCTCGTC GGGCGGCAAC TGGTCGAGCA GATTGAAGCG 
GAACTTTCCG ACGACGAGGA AGCTGGTTTG TTATTTATGT TTTGGATTGA GGGAACACGC 
GGGGCCGAAG CGGCCGCCGA ATTGGGTTGG GACCAGAAGC GCTTTGACGC GGCGAGAAAG 
CGCCTGCTGC GTCGGCTCGC ACCTCACGAT AGGCAGGGGT GA 

 

Protein sequence

MSDTVENDSR LSKREVEEEL QKLSEADWTR AEIYADFLSR SLAGCDGNDL LQMAMEKFLN 
MRRRWPRGLE PLKALFGAMR SISSNELKKE TNGPIDTFAV VSTTDESPDE GQVQPYAVAT 
TLETPEDVLV GRQLVEQIEA ELSDDEEAGL LFMFWIEGTR GAEAAAELGW DQKRFDAARK 
RLLRRLAPHD RQG