Gene Nham_1371 details

Gene Information

• Locus tag: Nham_1371
• ID: 4031842
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 1556479
• End bp: 1557057
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637969847
• Product: sigma-24 (FecI-like)
• Protein accession: YP_576655
• Protein GI: 92116926

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.117762
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGCAG CGGCGTCGGG CAGCCTGACT GTCGACGAAT TCATGTCAGC GCTTTACGGG 
CTGACGGAGC CGGAGTGGAC ACGCGTCGGC GAAGCGGCGC GGTGGTGCGG ACTATTGTGC 
TCGACCGACG GCGACGAGCT TCTGAACGAA GCCATAATGA GGACGGCGGA TGGCCGGCGT 
CATTATCCGA ACGACGTCCA ACCGGTCGCA TTCCTGATTA TGACGATGCG CAGCATCGCC 
CACGAGATGT ACGAGAACCG TCGCGGCCGG ATCGGTCTCG ACAACGCGAC GACGACGAAC 
ATCCGCGGAA ACGTCGTTCC CTTCCAGCCG ACTGACCAAC GGCCCGACCC GGAGATTAGT 
CTTGCGCAGG CAGAGTTCGA GAAGAAGTTC CGGTCCGACG TCCTTGGACT CTTCGAGGAC 
GACACTATCG CTAGGGATCT GGCCGATGGC GTGATGGAAG GGATGGAGGG CGAGGAATTG 
ATGACGGTGC TCGATCTCGA CAAGACCGCG TTCGCATCAA AGCGGCGGCT GGTCAGGCGT 
CGAATCGAGC AAGCATTTCC AGATGGATAC AAACCATGA 

 

Protein sequence

MDAAASGSLT VDEFMSALYG LTEPEWTRVG EAARWCGLLC STDGDELLNE AIMRTADGRR 
HYPNDVQPVA FLIMTMRSIA HEMYENRRGR IGLDNATTTN IRGNVVPFQP TDQRPDPEIS 
LAQAEFEKKF RSDVLGLFED DTIARDLADG VMEGMEGEEL MTVLDLDKTA FASKRRLVRR 
RIEQAFPDGY KP