6 homologs were found in PanDaTox collection
for query gene Ndas_R0074 on replicon NC_014211
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014211  Ndas_R0074  tRNA-Ser  100 
 
 
89 bp  176  6e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_R0005  tRNA-Ser  92.86 
 
 
90 bp  60  0.00000009  Thermobifida fusca YX  Bacteria  normal  0.933104  n/a   
 
 
-
 
NC_009380  Strop_R0061  tRNA-Ser  96.55 
 
 
87 bp  50.1  0.00009  Salinispora tropica CNB-440  Bacteria  normal  normal  0.017138 
 
 
-
 
NC_009953  Sare_R0063  tRNA-Ser  96.55 
 
 
90 bp  50.1  0.00009  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000545483 
 
 
-
 
NC_010622  Bphy_R0029  tRNA-Ser  96.55 
 
 
90 bp  50.1  0.00009  Burkholderia phymatum STM815  Bacteria  normal  0.124844  normal 
 
 
-
 
NC_013889  TK90_R0040  tRNA-Ser  96.3 
 
 
90 bp  46.1  0.001  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.66072  hitchhiker  0.00010969 
 
 
-
 
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