12 homologs were found in PanDaTox collection
for query gene Msil_1039 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011666  Msil_1039  plasmid stabilization system  100 
 
 
83 aa  165  2e-40  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0358287 
 
 
-
 
NC_010581  Bind_2414  plasmid stabilization system protein  79.52 
 
 
83 aa  135  2e-31  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.496322  normal 
 
 
-
 
NC_010511  M446_4070  plasmid stabilization system protein  45.33 
 
 
80 aa  60.5  0.000000009  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1680  hypothetical protein  43.21 
 
 
103 aa  57.4  0.00000006  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.521078 
 
 
-
 
NC_011894  Mnod_0603  plasmid stabilization system  48.61 
 
 
103 aa  57.4  0.00000007  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.837316  n/a   
 
 
-
 
NC_007925  RPC_3073  plasmid stabilization system protein  47.22 
 
 
83 aa  56.6  0.0000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.2431  normal  0.0660854 
 
 
-
 
NC_011832  Mpal_1786  hypothetical protein  34.12 
 
 
89 aa  46.2  0.0001  Methanosphaerula palustris E1-9c  Archaea  normal  0.697447  normal 
 
 
-
 
NC_013411  GYMC61_3192  plasmid stabilization system  42.11 
 
 
86 aa  45.1  0.0003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011060  Ppha_0985  addiction module toxin, RelE/StbE family  35 
 
 
85 aa  44.3  0.0007  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2268  XRE family transcriptional regulator  41.03 
 
 
201 aa  42.7  0.002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.924655  normal  0.398688 
 
 
-
 
NC_013216  Dtox_2458  addiction module toxin, RelE/StbE family  35.53 
 
 
84 aa  42.7  0.002  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.000000000245877  unclonable  0.000000000270671 
 
 
-
 
NC_013946  Mrub_0782  plasmid stabilization system  35.9 
 
 
85 aa  40.8  0.006  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.00543713  normal  0.858319 
 
 
-
 
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