14 homologs were found in PanDaTox collection
for query gene Mext_0005 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010172  Mext_0005  transcription factor  100 
 
 		 79 aa  160  7e-39  Methylobacterium extorquens PA1  Bacteria  normal  0.235769  normal  1 
 
 
-
 
NC_010505  Mrad2831_1129  transcription factor  70.51 
 
 		 78 aa  112  1.0000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.658914  normal  0.264959 
 
 
-
 
NC_010725  Mpop_1405  Rv0623 family protein transcription factor  47.44 
 
 		 78 aa  70.5  0.000000000008  Methylobacterium populi BJ001  Bacteria  normal  0.394705  normal  0.166983 
 
 
-
 
NC_011666  Msil_0703  Rv0623 family protein transcription factor  46.84 
 
 		 79 aa  69.3  0.00000000001  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_009467  Acry_3269  transcription factor  45.57 
 
 		 106 aa  68.6  0.00000000003  Acidiphilium cryptum JF-5  Bacteria  normal  0.398865  n/a   
 
 
-
 
NC_009469  Acry_3512  transcription factor  45.57 
 
 		 80 aa  67.8  0.00000000004  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_010580  Bind_3707  transcription factor  45.57 
 
 		 81 aa  60.1  0.00000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.116158 
 
 
-
 
NC_010338  Caul_4433  transcription factor  40.51 
 
 		 79 aa  58.5  0.00000003  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009669  Oant_4603  transcription factor  52.54 
 
 		 82 aa  53.9  0.0000007  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_0006  hypothetical protein  59.09 
 
 		 74 aa  49.7  0.00001  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.301233 
 
 
-
 
NC_007958  RPD_1446  Rv0623-like transcription factor  37.5 
 
 		 83 aa  46.2  0.0001  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011986  Avi_9881  hypothetical protein  44 
 
 		 79 aa  44.7  0.0004  Agrobacterium vitis S4  Bacteria  n/a    n/a   
 
 
-
 
NC_009717  Xaut_4794  hypothetical protein  46.43 
 
 		 261 aa  44.3  0.0006  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0389346  normal  1 
 
 
-
 
NC_009475  BBta_p0292  hypothetical protein  36.36 
 
 		 81 aa  43.9  0.0008  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  1 
 
 
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