Gene RPD_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1446 
Symbol 
ID4021923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1614656 
End bp1614907 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content63% 
IMG OID637961638 
ProductRv0623-like transcription factor 
Protein accessionYP_568584 
Protein GI91975925 
COG category[S] Function unknown 
COG ID[COG4423] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTCA ATATCAAGAA TGATGAAGCT CACCGACTGG CGAGCGAACT CGCGGAATTG 
ACCGGGGAAA GTCTGACCGC CGCCGTTACC GCAGCGCTCC GCGAACAGCT TGCGCGCGAG
CGCCGCCGCC GCCAGACGGA CAAGATCGCC GAACGACTCC TGAAGATCGG GGATCGATAT
GCAGCACTTC CGGACACCGG CCGCACCCCG GACGACGTCC TCGGCTACGA CGAACACGGG
CTACCGACAT GA
 
Protein sequence
MHLNIKNDEA HRLASELAEL TGESLTAAVT AALREQLARE RRRRQTDKIA ERLLKIGDRY 
AALPDTGRTP DDVLGYDEHG LPT