6 homologs were found in PanDaTox collection
for query gene Avi_9881 on replicon NC_011986
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011986  Avi_9881  hypothetical protein  100 
 
 
79 aa  159  1e-38  Agrobacterium vitis S4  Bacteria  n/a    n/a   
 
 
-
 
NC_010505  Mrad2831_1870  transcription factor  46.03 
 
 
80 aa  50.4  0.000007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.173194  normal  0.169343 
 
 
-
 
NC_009669  Oant_4603  transcription factor  34.94 
 
 
82 aa  46.6  0.0001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2286  transcription factor  40.74 
 
 
83 aa  45.8  0.0002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.285904 
 
 
-
 
NC_010172  Mext_0005  transcription factor  44 
 
 
79 aa  44.7  0.0004  Methylobacterium extorquens PA1  Bacteria  normal  0.235769  normal 
 
 
-
 
NC_010580  Bind_3707  transcription factor  40.82 
 
 
81 aa  40.4  0.009  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.116158 
 
 
-
 
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