6 homologs were found in PanDaTox collection
for query gene Memar_1481 on replicon NC_009051
Organism: Methanoculleus marisnigri JR1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009051  Memar_1481  HAT helix repeat-containing RNA-processing protein  100 
 
 
981 aa  2025    Methanoculleus marisnigri JR1  Archaea  hitchhiker  0.00406892  n/a   
 
 
-
 
NC_009832  Spro_1540  AAA ATPase  24.89 
 
 
778 aa  71.6  0.00000000006  Serratia proteamaculans 568  Bacteria  decreased coverage  0.000000740195  normal 
 
 
-
 
NC_009972  Haur_1112  NB-ARC domain-containing protein  25.48 
 
 
447 aa  47.8  0.001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0411959  n/a   
 
 
-
 
NC_009135  MmarC5_0901  TPR repeat-containing protein  26.98 
 
 
409 aa  46.2  0.003  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_010501  PputW619_4937  hypothetical protein  23.25 
 
 
822 aa  46.2  0.003  Pseudomonas putida W619  Bacteria  hitchhiker  0.000000992532  decreased coverage  0.0000000106484 
 
 
-
 
NC_009767  Rcas_3987  TPR repeat-containing protein  25.7 
 
 
1092 aa  45.4  0.005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.017736 
 
 
-
 
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