| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0901 |
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| Symbol | |
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| ID | 4928132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 883647 |
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| End bp | 884876 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640166400 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001097423 |
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| Protein GI | 134045937 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAC TTTTAGTGGC TACTATGGTC ATATTATCAA TTTTTTTACC ATTACCTACG
AATGAAAGTT TTAGTTCCTA TGCTGAAATG GGGGAGCAGT ACTATCTCGA AAAAGACTAC
GAAAATTCTA TAGAATGTTT TGATAAAGCA CTTGAGTTAG ATCCTGAAAA CACTCGTTCA
TTAGAATATT TAGGAAAATA CTCAATGAAA AATGGAGATT ATCATAAAGC AGAAAATTAT
TTTGATAGAT TAATTGAAAT AGATCCTGAA AATGAATGTG CTCTGAAAAA TTTAGGGCAA
ATATATATGG CGTATGAAGA ATATGAAAAA GCGCTTTATT ATTTTAATAA ATCACTTGAA
ATAGATAATT CCATTGGAAA AACTTGGTTT TACAAAGGAA TATGTTTAAA AATGCTTGGA
AACTATGATG AATCAATTGA ATCGTTTGAT AAATCTACAG GAAACTATGA AGAAATCGTT
TTGATATGGA ATGAACTTGG ATATATATAT TATCAGAATG AAGAATATGA AAAAGCATTA
GAATGTTTTG ATAAAGCATT ATTATTGAAT AGGAATCTCA AATATTCTTT CAATGGCAAA
GGGCTTTGTT ATGAAAAAAA AGAACAGTAC CTTTTGGCCA TTGAATGTTT TGATAAAGCA
TTGCTTCAGG ACAGTTTTTA TTATGGTGCC TGGCATAATA AGGGAATAGA ATACTATAAG
TTAAAAAATT ACTCTAGTGC AGTATTATGT TTTGATAAAG CATTGGAATT GAATAATTCC
AGCCCACACT GCTATTTTTA CAAAGCAGAT TCATTGAAAT GTCTGGGAGA ATATGAAAAA
GCAGTTTTAA ACTATAAAAA AGCAACTCAA CTTGATCCTG AAAATCCTGT TTTTTGGAGT
GGAATGGGAC TTTCATATAG TTATTTAAAA GACTATAATC GTTCAATTGA AGCTTATGAA
AAAGCAGTTG AGTTGACTCC AAACGATGAT GTTTTGTGGA GCAATATTGG ATATCTGCAG
TATAATAATA AAAATTATAA TGAATCTATT TCTTACTTTG AAAAAGCACT TGAATTAAAT
TCTGAAAATA AATATGCTTG GAATGGACTT GGAAATTCTT ATTTATTAAT TAAAAATTAT
GAAAAAGCAG TATTATGTTA TAATCGCGCA ATTGAAATAG ATCCAACATA TACTGAAGCT
AAAATAGGTA AATCCTTGAT TTCAAAATAA
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| Protein sequence | MIKLLVATMV ILSIFLPLPT NESFSSYAEM GEQYYLEKDY ENSIECFDKA LELDPENTRS
LEYLGKYSMK NGDYHKAENY FDRLIEIDPE NECALKNLGQ IYMAYEEYEK ALYYFNKSLE
IDNSIGKTWF YKGICLKMLG NYDESIESFD KSTGNYEEIV LIWNELGYIY YQNEEYEKAL
ECFDKALLLN RNLKYSFNGK GLCYEKKEQY LLAIECFDKA LLQDSFYYGA WHNKGIEYYK
LKNYSSAVLC FDKALELNNS SPHCYFYKAD SLKCLGEYEK AVLNYKKATQ LDPENPVFWS
GMGLSYSYLK DYNRSIEAYE KAVELTPNDD VLWSNIGYLQ YNNKNYNESI SYFEKALELN
SENKYAWNGL GNSYLLIKNY EKAVLCYNRA IEIDPTYTEA KIGKSLISK
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