| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1481 |
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| Symbol | |
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| ID | 4846617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1479213 |
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| End bp | 1482158 |
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| Gene Length | 2946 bp |
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| Protein Length | 981 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640116173 |
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| Product | HAT helix repeat-containing RNA-processing protein |
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| Protein accession | YP_001047392 |
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| Protein GI | 126179427 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00406892 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATTAA TCATAAATTT GGATGGTGCA GTTCAGGAAA TCAATAAGGC CAAGAGTAAT
ATTGAGGTTA TTGAAGCGAT TAACCGCTTT ACGGAAGAAT TCTACAAGAC GCTAGGCATT
CTGTTATATA TCCGCTATAG AAAGAACATA AAAGAAAATA ACGTCCAAAT TTGCAATGAC
ATCACCAACT TAATACAGGA TTATTTCCAA AAACCGACGT TTGATAGTTG GATGAAACTT
GCACAAAATT GCTACCTGGT TTTCAGTCAA ACGAACGATC CGTTTGTCGA GAGGCTAAAT
AAATCCTTAA ATAAGCAATT TCCGCAGAAC TCTATTGATA ATATACGGCA AATTGTAACA
GAAATTTATG GGCTCAAATC CTGTTCTATC AATCTTCCAC GAAGGGTTCA GTATGCATGG
TTTCTTGAGA AGATGAAAGA ATTACGAAAT TTTAGAGCCC ATCATTGGGA TAACAATACG
ATGTTAGATC CGCTTGTAAA ACATGGCATA AAGGACGCAG TTATTGCAAC AGTCTCCGAT
ATTTTCAATG ATGTTGACAT AAAGATTGTT AAACCTGAAA GTATTCAGAG AGAACACATT
AATACTTACC AATGGGATTC ACGGTCTGGA ACTTTTTCAC GGATGCAGGT GGCTGAAACA
TCACTGTTAC CAGAGTGTCT TGCGAAAACA TATGTAACTT TTCCTGATGA GGAAGATCTC
TTTTTAAATC CCACTAACCT GATAATTTTG GATGATAAAG AAGATAGAAT CTATGTGTAT
GGGAGTATGC AGAGTGATCA TTCGGCGTAC TTTACCAGTC TCCCGCGTTC TGGTGGAATT
AAGGAAGAAA AAATACCTTT CAAAGGTCAT GAAGAAGTCT TTTCATTGTC TCAGGTTGAG
GCTCAAAACG ATCGCATTAG GTTGACGTTG AAACAAAAAT TCGGGCAGAT CCGCCAGGAT
GGAGGAATAA TTCATAATTT CCCTGACCTT TGTGACTACT ATGTTGGCAG GCCGAAAAAA
GAACTTGAGT TACTTGAAAG ATTAGAACAT CCTCGTGCTT TCTCTATATC GTTATCCGGA
GGGGGAGGCT ATGGGAAAAC GGAATTAGTA AAGAAAGTTG TCTGGGATAT TGTTACAAAC
CCTGAGTTAA CGGAAATAGA TAGTCTATGC TATGATCTTA TCATATGGAT ATCGGCTAAA
GAGACACTGT TTGAGAAAGG GAAGATAAAC GAATTTACTT CATCATTTCA CAGTCTTGAA
GACTTCTTGG ATTGCATTTT ATACGTCACA AACAATATTC AGTATATTGA TCACTCAGAG
GAAAGTAAAA GAAATCTTAT CTGCGGAATT TTGAACTGCT ATGAATCAAC TCTGCTGGTA
ATCGACAATC TTGAAACGGT TGCGGATAAG AATTCTCTAT GGGCTTATCT TGACGTTCTT
CTTCGCGATG TCAAAAGTGG GATAAAATTT ATAATCACAT CGAGGGTTGA TGACTATACA
TTTGGTCAGT ATGTTATACC AGTTGGATCG ATGGAAGACG ATGAAGCTCA GCAATTGATC
TCTGAACAAT TAGATCGTTT GGGGCTTTTA AATCGTTATT CTAATCAGTC AGCACTGAAA
CAAATTGCAA ACATAAGTGC GAAGTCCCCC CTTCTGATCA TTTTTGTTGT TCAACTTCTA
GCAAGAGGCT ACACACTCAA AGAACTGAGT AAAGGAGAGA TCCAAGCATA TGAGCAAGCT
TTAAATTTCA TTTGCGACTT CCAGTGGAGA GAACTCTCGG ATTTGGCAAA AGATATACTC
ATGGCCGTAA CTGTAGCCAA TGGTACGTGT AGTTTCTCTC AAGTGCGTCA GATGTGCAGT
ATTGTTGATA ACACAGATTT CTTAACTGCA AAGGAAGAAT TGACCCAACG TTCTTTCATC
GTGCAAAGTG AGTTAGAAAA TTCCGTATTG TCTCTGTTAC CTCCAATTCA CGCATTTGTC
AAACACAAAT TAATAGAATA TCCTCACAAA GAGGAGGAAT TTGCCACACA GTGGAGAATT
CTCAATCTAG GGTTTGATCA AAAACCTAAG GATTCAAGTC AAAATTCCGC ATTTCCTTGT
GATGCTGATG AAATTCATCT GCGGCAATTG ATCCAGAAAG CTGAATCCTT CATCCGTATA
GGTTCGATCA CCTATGCCCA CGATTATTAT AAAAAGTGCA TTCAATTCTT CCCTGAAAAC
GCTATTGCGT GGAGAGAACT TGCTGAATTT GAGTTCAAAT TTTTGGAAGA TGATGATAAA
GCCCGTTCCT CCTTCCAGAA GGCGATTGAA TTTGATCCCG ATAATCCAAT TACTTACACG
AAACTTGCAT ATTGGGAGCA ACTTAGAGGA ACTGAACAAC AGATTGCCCA ATATGTCTTA
AATTCCATAG GCTATAATAA GAAGGCCTTA TTGCTGTACA CTGACGAAAG ATCCAAAAGA
ACTGTTAGGG ACCATATTGG ATCATCTTAC TTAAAATTAG GTGAGATTGA AAAAAATCTC
GGTCAACTAG CAAATTACCC TGATAAGCAG GATCATTTTA TAATGGCGGA TGAATATGTA
AAATTAGCGA TTAAAATATT CGAAGCCAAT GTTATTGATC AGCCACAAAA TGATGACGAT
CTTTATCACA ATGCTATAGA CTACAATTAT TTAACCCAAG CATACACTCG TGTTGCCCGT
AGGGATCAGA AAAATGCGGA CTACTTTTAT CAAAAAGCAC TTGTTTGTCT GGCAAAGGGC
TTCGAATCAA AACCAGATTA CGAAAGGTTG CTTTATACGC TTGGAGATCA CAATATAAAG
CGATTTTTGA GGAGCAAATA TAACATTATC GTTGACGACA TAGATCGCAA TATCGTAAAG
AGAAAAGTGA TAAGTATTGC AGAGAGGATT GAGGAGGACT TCAATAAGAT GCGACTGAAA
GTGTAA
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| Protein sequence | MGLIINLDGA VQEINKAKSN IEVIEAINRF TEEFYKTLGI LLYIRYRKNI KENNVQICND
ITNLIQDYFQ KPTFDSWMKL AQNCYLVFSQ TNDPFVERLN KSLNKQFPQN SIDNIRQIVT
EIYGLKSCSI NLPRRVQYAW FLEKMKELRN FRAHHWDNNT MLDPLVKHGI KDAVIATVSD
IFNDVDIKIV KPESIQREHI NTYQWDSRSG TFSRMQVAET SLLPECLAKT YVTFPDEEDL
FLNPTNLIIL DDKEDRIYVY GSMQSDHSAY FTSLPRSGGI KEEKIPFKGH EEVFSLSQVE
AQNDRIRLTL KQKFGQIRQD GGIIHNFPDL CDYYVGRPKK ELELLERLEH PRAFSISLSG
GGGYGKTELV KKVVWDIVTN PELTEIDSLC YDLIIWISAK ETLFEKGKIN EFTSSFHSLE
DFLDCILYVT NNIQYIDHSE ESKRNLICGI LNCYESTLLV IDNLETVADK NSLWAYLDVL
LRDVKSGIKF IITSRVDDYT FGQYVIPVGS MEDDEAQQLI SEQLDRLGLL NRYSNQSALK
QIANISAKSP LLIIFVVQLL ARGYTLKELS KGEIQAYEQA LNFICDFQWR ELSDLAKDIL
MAVTVANGTC SFSQVRQMCS IVDNTDFLTA KEELTQRSFI VQSELENSVL SLLPPIHAFV
KHKLIEYPHK EEEFATQWRI LNLGFDQKPK DSSQNSAFPC DADEIHLRQL IQKAESFIRI
GSITYAHDYY KKCIQFFPEN AIAWRELAEF EFKFLEDDDK ARSSFQKAIE FDPDNPITYT
KLAYWEQLRG TEQQIAQYVL NSIGYNKKAL LLYTDERSKR TVRDHIGSSY LKLGEIEKNL
GQLANYPDKQ DHFIMADEYV KLAIKIFEAN VIDQPQNDDD LYHNAIDYNY LTQAYTRVAR
RDQKNADYFY QKALVCLAKG FESKPDYERL LYTLGDHNIK RFLRSKYNII VDDIDRNIVK
RKVISIAERI EEDFNKMRLK V
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