10 homologs were found in PanDaTox collection
for query gene Lferr_1991 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_1991  hypothetical protein  100 
 
 
377 aa  766    Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.138166  normal 
 
 
-
 
NC_011761  AFE_2357  lipoprotein, putative  100 
 
 
377 aa  766    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1099  uncharacterized lipoprotein  22.09 
 
 
367 aa  50.8  0.00003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.822383  normal  0.47194 
 
 
-
 
NC_013889  TK90_0409  putative lipoprotein  22.36 
 
 
388 aa  50.1  0.00006  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.961142  normal 
 
 
-
 
NC_007614  Nmul_A1539  NlpBDapX lipoprotein  20.69 
 
 
374 aa  46.6  0.0007  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.591947  n/a   
 
 
-
 
NC_007947  Mfla_0842  uncharacterized lipoprotein  26.49 
 
 
412 aa  45.8  0.001  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00443208  normal 
 
 
-
 
NC_007947  Mfla_0986  uncharacterized lipoprotein  26.49 
 
 
412 aa  45.8  0.001  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00100518  normal  0.616376 
 
 
-
 
NC_011901  Tgr7_0828  NlpB/DapX family lipoprotein  25.47 
 
 
379 aa  45.8  0.001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0679  lipoprotein  25 
 
 
375 aa  44.7  0.003  Halothiobacillus neapolitanus c2  Bacteria  normal  0.826541  n/a   
 
 
-
 
NC_010524  Lcho_2641  NlpB/DapX family lipoprotein  24.88 
 
 
398 aa  43.9  0.005  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
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