| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2641 |
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| Symbol | |
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| ID | 6160920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2901209 |
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| End bp | 2902405 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665417 |
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| Product | NlpB/DapX family lipoprotein |
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| Protein accession | YP_001791671 |
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| Protein GI | 171059322 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3317] Uncharacterized lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATT CCCTGACCCG CGCCCCGCAA CGCCTGAGCG CCTCCCTGTG CATGACGGCG
CTGGGCCTGT TGCTGGCGCA AGGCCTTGGC GGCTGCTCGG CGGTGTCGAA CACGCTGGCA
CCCAACAAGG TCGACTACAA GGCCCAGGCA CAGCCTGCCA CCAAGCTCGA CGTGCCGCCC
GACCTGACCC AGCTGGCCAG CGATCCGCGC TACCAGCCGC CTACCGGCGC CAGCGTCAGC
GCCAACGCGC TGCAAAGCGC GGGCTCGGCG GTCCTGCCGG GCTCGGCCGC GCCGCAGCCC
GGCACCATCG CACCACGGGC AGCCGGCGGC ACCCGCATCG AGCGCTCCGG CAACCAGCGC
TGGCTCGTCA CGTCGTCGAC GCCGGAGCAG CTCTGGCCGG TGCTGCGCGA GTACTGGCAG
GCCAACGGCT TCACGTTGCT GGTCGACAAG CCCGAACTGG GCGTGATGGA AACCGACTGG
CTCGAGAACC GCGGCAAGCT GCCGCAGAAC ACCTTGAGCC GGGCGATCAG CAAGGTCTTC
GAAGCCCTCA CCGACAGCGA CGAGCGCGAC CGCTACCGCA TGCTGGTCGA ACGCGGCGCG
CAGGGCACCG AAGTCACCAT CAGCCACCGC GGTGCGGTCC AGGTCGTCAC GGGCGACCGC
AACAACGAAC AGGTTCGCTG GCAGACCCGG CCCACCGACC CCACCCTCGA AGCCGAAATG
CTGGCTCGCC TGCTGGCGCA CCTGGCACCG GCAGCAGATG CCACCGCGGC TGCGCCGGCA
CTGGCAGCGG CCGCACAGAC CGTCGCCGCC GCGCCGGCCG CGCCGCCGCG GGCCCGCATC
GATGCGTCGG CCGCGGTGCC GACGCTGCAG GTCGACGACG GATTCGATCG CGCCTGGCGC
CGTGTCGGTG TGGCGCTCGA TCGCAACGGC TTCACGGTCG AGGACCGCGA CCGCAGCCAG
GGCGTCTACT TCGTGCGCTA CGTCGACCCC AAGCTCGCCG GCAAGGAAGA CCCCAACTTC
ATCGCACGCC TGTTCGGCGC CAAGAAGGAA GACCTTTCGG GCAAGCGCTA CCGCGTTCAA
GTCGCCGCCG AAGGCAGTAC GGCCAGCACC GTGTCGGTGC TCAACAGCGA AGGCATGGCC
AGTGCCGACG AAAGCGCCCG CAACATCGCC CAACTGCTGC TTGTGGAGTT GCGCTGA
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| Protein sequence | MSDSLTRAPQ RLSASLCMTA LGLLLAQGLG GCSAVSNTLA PNKVDYKAQA QPATKLDVPP
DLTQLASDPR YQPPTGASVS ANALQSAGSA VLPGSAAPQP GTIAPRAAGG TRIERSGNQR
WLVTSSTPEQ LWPVLREYWQ ANGFTLLVDK PELGVMETDW LENRGKLPQN TLSRAISKVF
EALTDSDERD RYRMLVERGA QGTEVTISHR GAVQVVTGDR NNEQVRWQTR PTDPTLEAEM
LARLLAHLAP AADATAAAPA LAAAAQTVAA APAAPPRARI DASAAVPTLQ VDDGFDRAWR
RVGVALDRNG FTVEDRDRSQ GVYFVRYVDP KLAGKEDPNF IARLFGAKKE DLSGKRYRVQ
VAAEGSTAST VSVLNSEGMA SADESARNIA QLLLVELR
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