Gene Lferr_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1991 
Symbol 
ID6877980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1990391 
End bp1991524 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content60% 
IMG OID642789861 
Producthypothetical protein 
Protein accessionYP_002220415 
Protein GI198284094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.138166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGTT ACGTAGCTCT TGCCGTGGTC GCCACTCTCG GTTTGGGGGG GTGTTCGTAC 
ATTCCCTTCT TCAGGTCCAA CAACGGACCC CAATACCAGG ACTCCAAGGT GATGGAACCC
CTGAAGATCC CGCCGGACCT ACTGGTCCAG GCGCCGCAGC CGGGGGTTAC CATACCCGGG
GGGGCGGTAA CCTCCAGCGA GTTGCCGACG AATACGAATA GCGCCTCCGG TGGTTATGGA
CTGTTTCAAC CTCACGAGGC GGCCGGGCAG CAGCCGGTAG AGGAAAAAAC CCTCGCTGGC
GTGGGGGCGC AGATTCTGGG TGGCGGCGCG GACTTGCGGT TGAGCACGAC CGCCCGGCCA
GAGCGGATTT GGGCCGCCCT GAAAGCGGTA CTGGCGGCGG ATGATACCTC GGTGGCGAAA
TTTTCTCCTG AACAGGGTGA ACTGGTCACC GGCTGGCGTG ATTTCCGCAG TGGTCTGGCC
TTTGTGCTGG GGCATACTGT CGCACCAACC TATCGGGAGA AATACACTTT TCACCTGAGT
GCTGGTGAAA AGGGTGCGGA AATCCTGACG ATACAACAGG AACGCCTCTG GAATAATCCC
AACGGCAGCA GCGTGGGGTG GAAGAAGGTG CCCGCCGACG CCGGGCATAA TCGTCAGATT
ATGGAAGCGC TGCAAAAACG TCTGAGCGAG GAATCCATTC TCGCAGAAAT GCCGGAGATC
AAAGTGACCC GCTACCGGGA TGACCGCGGC CCTTATCTGG TGTTGAATGC CGTCCCCGCC
AAGGCGGAGC CCGCAGTACA AGTGGTCTTG CAGGGTCTGG GCTATCCCGT GCAAAGGGAA
GGCACGGGGA TATGGAAAGT GCAGGTCCGG AAGGGTGGTG CACAGGCAGG TCAGAAACAG
AGCTTCATCG GCGGCATCTT CCAGCGGACC TGGGATAATA TCAAGGCCAT CTGGAGCAGT
CGGGAGAAAC AGAAGCCCGT TTCTGTCCGG GTGACGCTGT TGCGCATGAA AGACGATACG
GGCAGCGTCC TGGAGACGAC GCCGGGCGTG GGCAAGGATG CGCCCAAATG GTCTGCAGAA
ATTCTCGACA AGCTGCAGGC GGGCCTGTCT CCCAAAAACG GAGATAAGGC ATGA
 
Protein sequence
MRRYVALAVV ATLGLGGCSY IPFFRSNNGP QYQDSKVMEP LKIPPDLLVQ APQPGVTIPG 
GAVTSSELPT NTNSASGGYG LFQPHEAAGQ QPVEEKTLAG VGAQILGGGA DLRLSTTARP
ERIWAALKAV LAADDTSVAK FSPEQGELVT GWRDFRSGLA FVLGHTVAPT YREKYTFHLS
AGEKGAEILT IQQERLWNNP NGSSVGWKKV PADAGHNRQI MEALQKRLSE ESILAEMPEI
KVTRYRDDRG PYLVLNAVPA KAEPAVQVVL QGLGYPVQRE GTGIWKVQVR KGGAQAGQKQ
SFIGGIFQRT WDNIKAIWSS REKQKPVSVR VTLLRMKDDT GSVLETTPGV GKDAPKWSAE
ILDKLQAGLS PKNGDKA