8 homologs were found in PanDaTox collection
for query gene Lcho_1997 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_1997  CRP/FNR family transcriptional regulator  100 
 
 		 233 aa  456  1e-127  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000000121238 
 
 
-
 
NC_008025  Dgeo_1419  Crp/FNR family transcriptional regulator  29.89 
 
 		 208 aa  47  0.0003  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.0779815 
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  26.92 
 
 		 234 aa  45.8  0.0006  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_4089  hypothetical protein  29.77 
 
 		 191 aa  44.7  0.001  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011981  Avi_7621  transcriptional activator Crp family  28.57 
 
 		 232 aa  44.7  0.001  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1660  Crp/FNR family transcriptional regulator  28.42 
 
 		 261 aa  42.4  0.006  Nocardioides sp. JS614  Bacteria  normal  0.74426  n/a   
 
 
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NC_010505  Mrad2831_2581  Crp/FNR family transcriptional regulator  29.9 
 
 		 222 aa  42.4  0.007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_1482  transcriptional regulator, Crp/Fnr family  29.89 
 
 		 196 aa  42  0.008  Meiothermus silvanus DSM 9946  Bacteria  normal  0.053801  hitchhiker  0.0000318932 
 
 
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