14 homologs were found in PanDaTox collection
for query gene Lcho_1540 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_1540  hypothetical protein  100 
 
 		 279 aa  541  1e-153  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0322986 
 
 
-
 
NC_008009  Acid345_0468  hypothetical protein  28.09 
 
 		 303 aa  69.7  0.00000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013440  Hoch_5160  4Fe-4S ferredoxin iron-sulfur binding domain protein  26.98 
 
 		 739 aa  65.1  0.000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.8765  normal  0.911102 
 
 
-
 
NC_007760  Adeh_2667  FAD-dependent pyridine nucleotide-disulphide oxidoreductase  34.04 
 
 		 748 aa  60.5  0.00000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2852  FAD-dependent pyridine nucleotide-disulphide oxidoreductase  33.33 
 
 		 748 aa  59.7  0.00000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0132054  n/a   
 
 
-
 
NC_011145  AnaeK_2758  FAD-dependent pyridine nucleotide-disulphide oxidoreductase  33.33 
 
 		 745 aa  59.3  0.00000006  Anaeromyxobacter sp. K  Bacteria  normal  0.202283  n/a   
 
 
-
 
NC_009675  Anae109_2646  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  35.29 
 
 		 740 aa  58.9  0.00000008  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0265662  normal  0.894509 
 
 
-
 
NC_013440  Hoch_0452  FAD-dependent pyridine nucleotide-disulphide oxidoreductase  32.71 
 
 		 304 aa  57.8  0.0000002  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.420259 
 
 
-
 
NC_007794  Saro_0300  hypothetical protein  28.19 
 
 		 298 aa  57  0.0000003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_0589  hypothetical protein  26.4 
 
 		 292 aa  52.4  0.000007  Sphingomonas wittichii RW1  Bacteria  normal  0.111043  normal  1 
 
 
-
 
NC_008048  Sala_0344  hypothetical protein  24.02 
 
 		 293 aa  47  0.0003  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.367723  normal  1 
 
 
-
 
NC_010524  Lcho_1137  hypothetical protein  35.4 
 
 		 192 aa  46.2  0.0006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_011004  Rpal_1086  hypothetical protein  30.97 
 
 		 231 aa  46.2  0.0006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009475  BBta_p0092  hypothetical protein  30.09 
 
 		 235 aa  43.5  0.004  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  0.237058 
 
 
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