Gene Lcho_1137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1137 
Symbol 
ID6163810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1218061 
End bp1218639 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content65% 
IMG OID641663891 
Producthypothetical protein 
Protein accessionYP_001790171 
Protein GI171057822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCA GACTGCTGCG CCGAGAAGTC CTTCCCTCCG TCCTCGCCTT CGTTGCGCTG 
GTCGTTGCGG CGCTGTTGAT CGACGCCGTG CTGCACGTGT TGGACGCGGT CTGGATCGGG 
CGCTATCTGG GCATTGCGGG CACGCTGCTG ATCCTGGGCT CGTTCCGCTA CTCGCTGCGC 
AAGCGCAAGC TGATCCGCTC CGGCCAGCCG ATGCAGTTGT TACGCAGGCA TGAGTACCTG 
GCCTGGCTCG GCTCGTTGCT GATCCTGGTG CACGCGGGCA TCCACTTCAA CGCCATCCTC 
GGCTGGCTGG CCATCGTGGC GATGCTGGTC AACGTCGGCA GCGGCCTGAC CGGCAAGTAC 
CTGCTCGAAC GCTCACGCCG CCGGCTCGAC GAGGCGCGCC AGCGGCTGCG CCAGCAAGGC 
CTGTCGGCCG ACGAACTCGA AGACCGCATG TACTGGGACA GCCTGACCTT CGACGTGGTC 
AAGAAGTGGC GGCTGGTGCA CTTCCCGATC ACGCTGGCCT TCGGCGTGCT CGCACTCGGG 
CACATCGTGG CGGTGTTCCT GTTCTGGGGC TGGAAATGA
 
Protein sequence
MQARLLRREV LPSVLAFVAL VVAALLIDAV LHVLDAVWIG RYLGIAGTLL ILGSFRYSLR 
KRKLIRSGQP MQLLRRHEYL AWLGSLLILV HAGIHFNAIL GWLAIVAMLV NVGSGLTGKY 
LLERSRRRLD EARQRLRQQG LSADELEDRM YWDSLTFDVV KKWRLVHFPI TLAFGVLALG 
HIVAVFLFWG WK