Gene Sala_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0344 
Symbol 
ID4081042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp348227 
End bp349108 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content66% 
IMG OID638008703 
Producthypothetical protein 
Protein accessionYP_615400 
Protein GI103485839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.367723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCC TGTTCCAGCG GCGCCGGTCG AAGGCCACAC AGGTAGAGCG GGTGCGCGAG 
CGCCAGCACG AGGGCTTCCT GCGCTATGCG GGGTTTCGCT GGGCGAAGAT TTCGGGCGGG
CTCTGCCTGC TGGTCATCCT GTCCTATGCG CTGATCGATG TGACGCCGCG GCACAATGGG
GGGAGCTGGT ACGGCTATAC GCTCGGCACG ATCGGCGCGC TGCTGATCCT GTGGCTCACC
GCGCTCGGCT ATCGCAAGCG CAAGATGACG CGCGATTACT GGTCGCTCAA AGCCTGGACC
TCGGCGCATG TCTATCTGGG TTTGAGCCTG ATCATCATCG GCACCTGGCA CACCGGGTTC
CAGCTCGGCT GGAACGTCCA CACGCTCGCC TGGGTGCTGA TGATGCTCGT CATCCTGTCG
GGGCTCTATG GCGTGATCGT CTATGCGACC TTGCCCGCGG CGCTGTCGAA CAACCGCGAT
CAGATGACGC AGATGCAGAT GCTGGAGGCG ATCCGCGCCT TTGACCGGCA ATTGCACAGC
GCCGCGCAGC CGCTGACCCC GGCGGACAGC GCGGCGGTGC TCGGCTCGCT CGACCAGGAT
CCGTTTGCGG GCGGCGCTTG GGCACGGCTG CGCGGACGCT ATCCGGGCTG CGCTACCGCC
GCCGCGCGCC GGGCGCTGGC GGCATCGCAG GGTGGCAATG CCGACGCGCG CGCCAAGGTC
GTGCAGCTGT TGTCGCAGAA GGAGGCGGCG CTGGCGCGGC TGCGCGAACA TCTGCGGCTG
CGCGCGCTGC TCGAAATCTG GCTCTATGTG CATGTGCCGC TGACCTTTGC GCTGATCGCG
GCGCTGTCGG CGCATATCGT CAGCGTCTTT TTCTATTGGT GA
 
Protein sequence
MASLFQRRRS KATQVERVRE RQHEGFLRYA GFRWAKISGG LCLLVILSYA LIDVTPRHNG 
GSWYGYTLGT IGALLILWLT ALGYRKRKMT RDYWSLKAWT SAHVYLGLSL IIIGTWHTGF
QLGWNVHTLA WVLMMLVILS GLYGVIVYAT LPAALSNNRD QMTQMQMLEA IRAFDRQLHS
AAQPLTPADS AAVLGSLDQD PFAGGAWARL RGRYPGCATA AARRALAASQ GGNADARAKV
VQLLSQKEAA LARLREHLRL RALLEIWLYV HVPLTFALIA ALSAHIVSVF FYW