3 homologs were found in PanDaTox collection
for query gene Lcho_0537 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_0537  hypothetical protein  100 
 
 
640 aa  1253    Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007969  Pcryo_1046  hypothetical protein  22.4 
 
 
1757 aa  49.3  0.0002  Psychrobacter cryohalolentis K5  Bacteria  normal  0.273403  normal 
 
 
-
 
NC_012792  Vapar_5943  conserved repeat domain protein  27.78 
 
 
2434 aa  45.1  0.005  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
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