| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0537 |
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| Symbol | |
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| ID | 6161331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 584714 |
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| End bp | 586636 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641663286 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789577 |
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| Protein GI | 171057228 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGG CCCCCACCCG ACTCCGACCA CTGTGCGTCC TCCTGGTCTG GCTGCCGCTC
GGGCCGGCGC TGGCCCAGGA GCGCGAGAAG CCGCGCGAAT TCCTCGACAG CCTGGCCGAC
AACGCCCTGG CGCCGGACCG CAACGCCATC TACCGCCGCG ACGGCAAGCG CCGCGAGATC
GACCTCGGCG ACGGCATCGA GGCCTCGCTC GACGAGGCCA AGGCCTCGTT CCTGTCCAAC
CCGCGCGGCA CGCCCGGCGG CGCGGGCGTG GTGTCGCGCG TGATCGGCAT CAGCGCGCGC
AAGCCGTCGT ACGGGTACGA CCTGAGCTAC GGGCGCAGCG CGCTGGGCCG GCGCGCCGGC
CTGAGCGGCG GCTGGCGCCT CGGCGAGCGC GTCGTGCTGT ACGCCGACGT GCACGAGAAC
CGCAGCGAGA TCGACGACCT GCCCGGCACG CCGTCCACCC GATTGCGCCG CCGCGACAGC
GAGTTCGGCC TGCGCTGGCG CAGCGCCGAC GGCAGCACCA GCACCTGGAC GACCGACCTG
GCGCTGCACC AGTCGCGCCT GGCGCCCGAT CCCGCGTCGG CCCTGGTGCC CGAGGCCACC
GGCGAGCAGC TGGTCTGGCG CGGCCGGCTC GAGCCCGCAT CCTGGCCCGG CCTGAGCCTG
ATGGCGCAAC TCAACCATGT GCTGGGCCGG GAGCCGGCAC CGAGCACCGA ACTGAGCGGC
CACCGGATCG GCTTGGGCGC CGACTGGCGG CTGGCCGACG GCTGGGGGCC GCTGCCCGCC
GGCAGCCTGC TGGCCTGGCG TGAATCGCCC CGCCTCGGCC TGCTGGGCGA CGACGAAGCG
CTCACCCTGC CCGCCGCGTA CCGCCGCAGC ATCGGGCTCG AACTGCCCGA CGGCAGCGGC
CGCGGCCATG TCTACACGCA GCTGCGCCAT CGCAGCCTGG CCGACCGCGA CGACGCGCTG
GGCGTGCTCG GCTGGCAGCG CAACTGGGCG CCGTGGCCGC GCTGGGGCCT GGACACGCAG
CTCGAGCAGG CCGTGCCGCT GGCCGGGCGC TACCCGATCC GCGCCACCCA GGCGGGCGGA
CGGCTCTCCA CCAGCCGGTT TCCGCGCCTG AGCTTTTCGA CCGCGCTCGA CCTCGTCAAC
GCCAGCACCT CCGACAGCGC GTACCACGAG ATCAAGCTGA CCCAGCGTCT GGCCGACGAC
TGGCTGGGCG CCCTGCGCCT GAGCGTCAGC CGCAGCCAGC CGCACGGCAA CTCGGCGGCC
GGCAGCACCG ACTACAAGGG CGCGCTGGCG CTGGGCTGGC GCGAGCCGCA GGCGCGTGCG
CTGCACCTGC TCAGCCGCAT GACCTGGTCG GGTCGCGAGG TCGACGCCGG CGTGCCGGCC
TCGACCTCGG CCGACCGGCG TGCGCGCATC TGGCTCGGCC ATGCCGGCTA CCTGTTCGAC
GACCATCACA CGCTGACCGT GCGGCTGTCG CACCGCACCG CACGCGACGA AACGCGGCTC
GACGGCAACG GCCTGGTCCT GCCGCACCGC ACGCAGTTCT GGCTGACACG CTGGATCTGG
GAGCAGGACC GCGAGGGCGA CCAGCGCTGG AGCCTGAGCG CCCACGTGGC CGGCCGCAGC
GACAACCTCG ACGGTGCGGC GCGCGCCTGG GGCGCCGAAC TCGGCTACCG CGTCAGCAGC
AAGGCCGCGC TGACGCTGGG CTACAACCCG CGCGGGTTTG CCGACAACGA GATCACGGTC
GAGGAGCGCC CGCGCAAGGG TTTCACCTTG CGGCTGCGCT TCACGATCGA GGGCGCGCTG
GCGCGCTGGC TCGACAACGG CCGCAGCGGC ACGGCCACGC CCTGGTCGCT GCCCGACAAC
CCGCCGGCCG GCCTGGCACC CAGCCTCGAC CGGGCACAGG AACAATCGGC GGCGGGTTTC
TGA
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| Protein sequence | MKPAPTRLRP LCVLLVWLPL GPALAQEREK PREFLDSLAD NALAPDRNAI YRRDGKRREI
DLGDGIEASL DEAKASFLSN PRGTPGGAGV VSRVIGISAR KPSYGYDLSY GRSALGRRAG
LSGGWRLGER VVLYADVHEN RSEIDDLPGT PSTRLRRRDS EFGLRWRSAD GSTSTWTTDL
ALHQSRLAPD PASALVPEAT GEQLVWRGRL EPASWPGLSL MAQLNHVLGR EPAPSTELSG
HRIGLGADWR LADGWGPLPA GSLLAWRESP RLGLLGDDEA LTLPAAYRRS IGLELPDGSG
RGHVYTQLRH RSLADRDDAL GVLGWQRNWA PWPRWGLDTQ LEQAVPLAGR YPIRATQAGG
RLSTSRFPRL SFSTALDLVN ASTSDSAYHE IKLTQRLADD WLGALRLSVS RSQPHGNSAA
GSTDYKGALA LGWREPQARA LHLLSRMTWS GREVDAGVPA STSADRRARI WLGHAGYLFD
DHHTLTVRLS HRTARDETRL DGNGLVLPHR TQFWLTRWIW EQDREGDQRW SLSAHVAGRS
DNLDGAARAW GAELGYRVSS KAALTLGYNP RGFADNEITV EERPRKGFTL RLRFTIEGAL
ARWLDNGRSG TATPWSLPDN PPAGLAPSLD RAQEQSAAGF
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