8 homologs were found in PanDaTox collection
for query gene LGAS_1671 on replicon NC_008530
Organism: Lactobacillus gasseri ATCC 33323



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008530  LGAS_1671  hypothetical protein  100 
 
 
2552 aa  5119    Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_0410  adhesion exoprotein  39 
 
 
2457 aa  162  7e-38  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_004116  SAG0433  surface protein Rib  36.25 
 
 
1389 aa  109  5e-22  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_1196  LPXTG-motif cell wall anchor domain protein  37.17 
 
 
3173 aa  72.8  0.00000000007  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_008530  LGAS_0143  adhesion exoprotein  25.89 
 
 
2823 aa  66.2  0.000000007  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_0942  adhesion exoprotein  25.4 
 
 
2833 aa  65.9  0.000000009  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_0045  adhesion exoprotein  26.67 
 
 
3692 aa  58.9  0.000001  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_0866  hypothetical protein  45.9 
 
 
268 aa  58.9  0.000001  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00213214  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>