| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1671 |
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| Symbol | |
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| ID | 4439782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1645656 |
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| End bp | 1653314 |
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| Gene Length | 7659 bp |
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| Protein Length | 2552 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639673493 |
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| Product | hypothetical protein |
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| Protein accession | YP_815401 |
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| Protein GI | 116630229 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR02331] Rib/alpha/Esp surface antigen repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCAAAA TGCAGTTACC TTTACATAGA AATAATCAAA CTAATACCAC TCCAATTGAA
AACAATAACT GGAATATTAC CTTAGATAAC GTAACAATTG GCTCAACTGG TGCAAAGGGT
ATCTTTGATT TTAGCAGCCT TTCAGCCGTT AATGCTGCTA AAAATGCTGT GACATTTAAG
AATGTTACTT CAACTACTGA TACTAATCGT GTTCTTTCAA GTGCGGTAAA TGCTAACTTT
AGTGGGGTTA ACAATTTTAA TAGTAAACTA GTAGGAGATA GTGCTAGTTC TACTTCATTA
AGTGGCACTC TTTCTCTTTC TGGCGCTTTA TTCAAAGTTA ATAGTTTAAG TGTATTAGAT
GGAACAACTA CTATTAATGT TAATAACCAA AAAGGTGATA CAACTGCTTT TGAAATTACT
AATGGTAATG CAGTTGTTAA GAGTGGCGCT ACATTAAATA TTAGTAGTGA ATCTGCTAAC
TTTGGCGGTA TTTACTTTGA TAAAGGTGCT GGAACTCAAG ATATTGATGC TGCTACAGTT
GGTGTAACTC GCTTAGAAAG CGGCGCAGTT GTCAACATGG ATCTTGGTGC TGGCCGTTCA
ATGGCAATTA TGAATGGTAG TCACCTTGAT TTACAAGATG GTTCACAATT AAACATCAAC
ACCAAGATTA ATACAAAGGG CTTCCGTGCT TATGCACCGA TTAACCTAGA CTCAACTGGT
AATATTACGG ATAGTACCTT ACGGGTTGGT AAAGATGCTA TTCTTAAGGT GATTCGTGCT
GGTGTTAACG ATTCTGACTC GCCATTAGTT GCCATGGGTC CGACTAGTGG TAACGGTCAA
ACTTATCACT TTGAAGTTAA TGGTGGTAGT TTGATCTTGC ATGATTCAGC TTATTCTTCA
CTTTTACCAG ACCAATATAC TTTGGCTAAG GCTGGTAAGT ACGGTGAAAG TTGGCCAGGT
TTACTTACTA TGTGGGGAAC TAGCAGTTAT AATTATGTGA ACTTCACGGA TGCTAAATAT
ATTGATTTAG AAAGAAATTC TGAGGGTCAT AAAGCTGGCT ACTTAGTTCA CCTTGAAGCA
GCTGCTAACC CAAGTAATAC TAACCAGATA ACTATTACTA ATTCAACTGC AAATGGCTTT
ACTCCATTGA CGATGATTCC TGCAGGGGAA AGTAATCCTG TAACTTGGCA AATTAAATCT
TTAAGTAACC TATCTCAAGG TGGTACTAAC TCGTATGCTT TCCGTGCTAA GGGTAAAGGA
TTTGATGCAA GCAATACGGT TCTTCCACCA TATACATATG GTTCTGAATA CATGAACGGT
TCTGGCAATG CTGCAAATAC TGCTGGTGGT ACTAATACTG TCACCTTAGC TGATGGCGGA
GAATTTGCAA ATGGTGCTGT TCAGCATGAT TCTGATGCAT TGCAACAGTT TATTAATCAC
TTTAGCTGGT GGAATACTAA TGGTGTTAAA TTTGGTAGTG ACTTAATAGA TAACAATCAA
TATCAACCTG CTTATGATCC AATGAATGTT AAGCAAGGTG AGTCTAAGAG CGAAGATCCA
AAATATGTCA CTAGCCAAGA GGGTAACATT ACTATTAATC CAGATGGTAA AGCTCCAGAA
GGTACAAAAT ATACCAAGGG TGATGCTAGT CAAGGATTTG TAACTGTTGA TCCTGATAGT
GGTAAATTAA CGATTGCACC AACAAGTGAA AATAGTAAAA CTGGTCTAGT TTTAGTTCCA
GTTGAAGTAA CTTATCCAGA CAGTACTAAG GATGTTGTGA ATGTTCCAGT TTACATTGGT
GACGGTACAC ATACTGGTAC AATTACTAAA GACGAAAATG GTAAGGTAAC AGGTGCTTAC
GAAGTTGTTA CTGATATTTC ATCAATTAAG GCTCATGAAA CTTCCGATCA TTCACAAGTT
CTTAATGCTG GGGATGCTGT TTCAAAGATT AACCACTACA CAATTAATAC TGATGCAGAA
GGTAAAGAAA CTGTTAGTGA ACCAACTGCT GTGGAGAAGA GTAATGCAAC TATTGAATGG
CAAGGAAGTG CTCCTTCAAC TGTTGTAACT ACTCCTTCAG CAAGTGAAAA CTTGAATGGT
ACTGTTCAAG TTACAGTTAA TGGTACAGAA GTTAATAGCA ACAAATTAAC AATTCCAGCA
GCTGGTGCTA CTGCTAAAGA TGTTTCTACT CCAGTTGAAG TAGTTGTTGG TCAAGAATTA
ACTGACGAAC AAGCAAGAGA ATTAATTGAC ACTAGTTCTT TAGCTCACGC TAATATTCAT
TACACAGCTA CTTGGGCACC TGCTCCTAGT CTTGGTGACA CTAATGCAAC TATTAAGTTG
ACTTTTGATG ATGAGTACGC TTCAGGTAAA AAGACTTACT TAAACGTTGT AACTAAAGAT
AATTCTATTA AGGTGGTTCC AACAGCAAAT GATGCTGATA AATATGAACC AAGCTACAAT
CCAATTGGTG GTAGACCTGG TCAAACGGTA ACTACTGATG TTCATTACAC CCCAACCCTT
CCAGATTCAG TAAAACCAAC TTATAAACTT GGTGATAATG CTCCAGCAGG TGCAGAAGTT
GATCCAAACA TTGGTAAAGT TTCTTACACT ATTCCAAGTG GTTCAGATAC TGGTGTTGTA
ACTATTCCAG TTACTATAAC TTATCCAGAT AATACTGCTG AAAGACCATC TGTTGATCAT
GCAACTGCAA CAGTTGTTGT TGTAAAGCCA CAAAATGTAA CTAAACCAAG CGATCCAACT
AATAACACTT ATAAGCCAAG TGATGGTATT CATAATCCAA ATAATTTACC AGAAGGTACT
ACTATTACTT GGAGAGACAA TGGTACTGAT CCAAAGCCAT TCCCAGATAA ACCTGAAACT
CAAGTAATTA AAGTTACAGT TCCTGGCAAG AATAATCAAC CTGGTACTAC GGTATACGTT
CCAGTAACTG TTGGTATACC AGGTGATACT GAGATTATTT ATGGTACCAA CACAACTACA
AGCTACACAA TTGGTACTTA TACTGCTCAC AAGACCACTG ATGGCAGTGT TGAAAATATT
CCAGTTCCAG CAATTACTGA AATTACATTT AAGAATGAAG ATAGTGAATG GAATGCTACT
GATTGGGTAA CCTACAAGCT AGAAGGTAAT ACTTACAAGA TCACGGAGAA GCATGGTAAC
CCTACATTAA ACAATGGCGC TTCAGCTCCA GAATCATTCT CTGCTAATGA TGTAACTACT
AAGTGGATGG AAAACAGGGA GCCTAATACT AATGTAGCTA ACTATGGCGA TAAAACTGGT
TCATCATTAG CATCACAACA AACTAATTCA TCTACTGATC AACGTACTGG TGAAGGCGAC
AATCTTCCAG GTAACTCTAA GACTCGTGCA ACTATTCATT TAACAGGTAC AGCCAAGGAA
ATCTTTGGTT CTGATCCTAA CTGGATTAAT GTCTTTGGTA ATATTTATGG TGCAACAACT
GGTGCTACTG AAACTTACAA ACAAGGTCAA GATATTAGTG GTATTTCCCA AGATGCATTC
CGTAAGTTAA TTAACGTTAC TGATCTTGGA CAAGCAGGTT GGAATGGTCA AAATATCAAT
CCAAATGCAC CTCAAGTATT AGCTTACATT GAAGGTACTG ATAATAGTCG TCAATTTGCA
ATGACTTGGG CTCCAAACGG TATGCCATCT ACTAGAGATA TTCAGAATAA TGTTACAGGA
ACAGTTCGGA TTAGCTTTAA CGATGGTACT TACTTAGACG TCAAGGCTAA TATTAATGTG
GTTGCTGATT CAAATACTGA TAAGCCAGAT GATCAGAAGA CTAGCTTTAG TCAGAGAATT
TCTTACCAAT TTAATGGTCA AGAAGTAGCA AGTCATACTA TTGCTGATAT TGCTAAGGGA
TCAAGCTTAA CTGCTGATCA ATTAAAGAGC GCAATTGATG GTAACTTGCC AAATAACTAC
AGCATTGCTG ATGGTTATAC TTACCCAGCT GCCGAGAATA ACATTAATTC TCAACCAGCT
GAAATTATAG TTCCATTAAA GCAAAGTCAA AAACAACATG ATGATTCTGA TTACAACGCT
CAAGTAATTG TTAAGTATGT TGATAGTACT AATAACGCAC CATTAAAGAC TAAGAATGGT
AAAGATGAGT TGACCTTTGA CTTCAACAAG AAGGAAGGCT TAAAGGCTTC AACTTTGAAG
GCTAATATTG ACAATAATAT TCCAGCTGGT TGGAAGATTG CTGAAGGCTT TACTTATCCA
GGTGATCAAA CTGACAATAA TACAATTACG GTTAAATTAG TTAAGAACAC AGTAACTCCA
GGTGAACCAG GCGTTACTCC AGATAATCCT GAATACAAAG ACTTGTTCAC TACTTCAACT
CGTACAATTA ATGTTTATAA GACTGACAAT TCAGCAATTG ATCATACTGA AAAGCAAACT
ATTACATTTG GTCGGACTGG TGTGCTTGAT CAATATACTG GCAAGATCAT GGAAGGCTCA
GAAGGTACTT GGTACGTTTA CAACACAACT ACTAACAAAT TAACTTCTGA TAAGACTGGT
ACTTGGGCAG AATACACTGA CATTGCTACT GCTCCGCAAG GCTATGACTA CATGATTGAT
GGCGTAAAGA CTACAGAAGC TAAAGTTGCT GCTGAAAGTT CTGTTGGTCC AAATACCGTC
AAGATGATTG ATGTTAAGTA TGTTGCTCAA GACTCTACTC CAGTTCCATA TGATCCTTCT
AACAAAGATA TGAATATGGA TGTAACTCGT ACAATTAAGT ACGATGTTTC TGGAACTGGT
CATGCAGCAA TTGCTGATCA AACACAAACG GTTCATTATG TACGTAAAGA TGCTAATGGC
AATGCTGGCT ATTACAATCC TGTAACTGGT AAAACTACTT GGGTAGCATG GACTCCAGAA
GCTGGTTCTG CTGAATTCTC CGCTAAGAAT GTTGAACAAA TTTCAGGATT TGATTCATAT
GTTAACGGTG AAAAAGGTAC TCAAGCCCCT GTAGCAACTA TTACTACCAA AGAAATTGAT
GGTTATGCAA CACCACAAAA TGGTAAGACC GTAACTGTAA CATACAAGGC GGTATCGCCA
ACTGAAGAAA GCTTCACGCA AGCTATTAAA TATGTTGATG AAAAGGGTCA AGAGCTAGCA
ACTACTGCAG ATGCATTTAC TGGTACATTC CCTTCTGATA ATCCAGCTAC AGTATCTGCT
GAAGAAATTA AGAATCAAAT TAATAACGAT TTGAAGAATA ATAGTGCTCT TAAAGGCTGG
GTTGTTGCAG GAAATTACCC TGTAGCTGAA ACTATTACTG AGAAGAATCC AGCAGCTTTA
ACTGTAACTC TTAAGCATGG TACTAAATCT GTAACTCCAA CAACTCCAGG CGTAACTCCA
ACTGAGCCTA AGTACAAGGA TATGTTTACA AGCGTTAGCC GTGATATTTA CCAAACTAAA
CCAGGTGAGG AAGAACAATT AATTTCAACT CAAACTGTTA ACTTTGGTAG AAACGGTGTT
GAAGATTTAG TAACTGGAGA GGTTACTGGA ACTGGCGCTT GGGAAGTTGG TAAGATCGAA
AACAACAAGT TCGTTTTAGG CGGCGAAGCA GAATATCCAA CTGCAGCAGT AGAACAAATT
TCTGGTTACG ATTCATACGT AAATGGAACT AAAGCAACTA AAGTTCAATC AGCTTCCGCA
ATCAAAGACG GCACACCAGT AAATGGTGAA GCAATTCATA TTACTTACCA ACAAAGTGAA
ACTCCAGTTG CAGATGTAAC TGTAAGTTAT CAATTCTATG ACACTATTGA CAAGAAGAAT
GTTGGTAATC CAATTGTTGT AAGTGGTAAG CCAGGTACTA ATGCCAAGAC TAACTTAACC
ATTCCAGTAG GTTACAAGTT AGCTGCAGAT CAAACATTGC CAGAAAATGT AATTATTCCT
ACTAAGGATG AAGCAGTAGT TATTAACTTA GTTCACGCAA CAAAGGACGT TACTCCAACA
ACCCCAGGTG TAAATCCAAC TGAGCCTAAG TACAAGGATA TGTTTACAAG CGTTAGCCGT
GATATTTACC AAACTAAACC AGGTGAGGAA GAACAATTAA TTTCAACTCA AACTGTTAAC
TTTGGTAGAA ACGGTGTTGA AGACTTGGTA ACTGGAGAGG TTACTGGAAC TGGCGCTTGG
GAAGTTGGTA AGATCGAAAA CAACAAGTTC ATTTTAGGCG GCGAAGCAGA ATATCCAACT
GCAGCAGTAG AACAAATTTC TGGTTACGAT TCATACGTAA ATGGAACTAA AGCAACTGAA
GTTCAATCAG CTTCCGCAAT CAAAGACGGC ACACCAGTAA ATGGTGAAGC AGTTCATATT
ACTTACCAAA AGAGTAGTAC AGTAACTCCA TATGATCCAA ATAATAAGGA CATGAACAAA
GACGTTGTTC GTACAATTAC TGTTAACAAG ATTGATGGAA CAACTGAAAC GATTGTTCAA
ACAGTTCACT TCGTTCGTGG CGGTGAAGGT GAAAATGTAG AAGCTGATAC TCCATGGGCT
GTTGGCGTAA GAGATGGCAA TACTTGGAAG TCAACTGGAG CAACTGAAGG TACTTGGCCA
GAATACAATG TTCCACAAGT AACTGACTAT ACTTCAACCG TTGATGGTAG AGATGCAAAA
GTTGTTTTAG CTGATAAGAA CGTGAATGCT AACACACCAA ATACCAACGT TGTAGTTGCT
TACACTAAGA CTACAACACC AACTGATGCC GATAAGTACA CTCCAGAGGG TCAAGATGTT
CACACTACCC CAGGCGTAGT GCCACCAGCA GAAAAGGGTA TAAAGAACAA GGATGATCTG
CCAAAAGGCA CTAAGTACAC ATGGGAGAAG ACCCCAGATG TAACTGAGCC AGGTAAGACT
ACAGGCACAG TAATCGTAAC TTACCCAGAT GGTTCAAAGG ATAAAGTTGA TGTTCCAGTA
ATTATTGACA ATCCAACTAC ACCAACTGAT GCCGATAAGT ACACTCCAGA GGGTCAAGAT
GTTCACACTA CCCCAGGCGT AGTACCACCA GCAGAAAAGG GTATTAAGAA CAAGGATGAC
ATGCCAAAAG GCACTAAGTA CACATGGGAA AAGACTCCAG ATGTAACTAA GCCAGGCAAG
ACCACAGGCA CAGTAATCGT AACTTACCCA GATGGTTCAA AGGATAAGGT TAACGTAACA
GTAATTATCG GTACGAACCA TGTAACTCCA GAACCGCAAC CAATTCACAC TACTCCAGGT
GTTGTTCCAA ACCCATCAGA AGGAATTAAG AACAAGGATG ACATGCCAGA AGGTACTAAG
TACACTTGGA AAGAAGTACC AGATATTTCT ACAATTGGTG AACATACAGG CGTTGTTACA
GTAACTTATC CAGATGGCTC TAGTGTAGAT GTAACAGTTA AGGTCTATGT AGACGCTACT
GGAACAAGTG ATAACAATAG TGGTAAGACT ACAGAAACTA ATTCTGAAGC CAACACTGCA
AAGGCAGCTA CTGTAAATGA AAATCACCAT GCTGAAAAGA ATACATTGCC ACAAACTGGT
GCTAAATCAG AAAATACAGC TGGTATCTTA GGTTTAGCAA TTGCTACAGT AGGTAGTTTA
TTCGGATTAG GCGTAGATAG AAAAAAGCGT CAAAAATAA
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| Protein sequence | MVKMQLPLHR NNQTNTTPIE NNNWNITLDN VTIGSTGAKG IFDFSSLSAV NAAKNAVTFK
NVTSTTDTNR VLSSAVNANF SGVNNFNSKL VGDSASSTSL SGTLSLSGAL FKVNSLSVLD
GTTTINVNNQ KGDTTAFEIT NGNAVVKSGA TLNISSESAN FGGIYFDKGA GTQDIDAATV
GVTRLESGAV VNMDLGAGRS MAIMNGSHLD LQDGSQLNIN TKINTKGFRA YAPINLDSTG
NITDSTLRVG KDAILKVIRA GVNDSDSPLV AMGPTSGNGQ TYHFEVNGGS LILHDSAYSS
LLPDQYTLAK AGKYGESWPG LLTMWGTSSY NYVNFTDAKY IDLERNSEGH KAGYLVHLEA
AANPSNTNQI TITNSTANGF TPLTMIPAGE SNPVTWQIKS LSNLSQGGTN SYAFRAKGKG
FDASNTVLPP YTYGSEYMNG SGNAANTAGG TNTVTLADGG EFANGAVQHD SDALQQFINH
FSWWNTNGVK FGSDLIDNNQ YQPAYDPMNV KQGESKSEDP KYVTSQEGNI TINPDGKAPE
GTKYTKGDAS QGFVTVDPDS GKLTIAPTSE NSKTGLVLVP VEVTYPDSTK DVVNVPVYIG
DGTHTGTITK DENGKVTGAY EVVTDISSIK AHETSDHSQV LNAGDAVSKI NHYTINTDAE
GKETVSEPTA VEKSNATIEW QGSAPSTVVT TPSASENLNG TVQVTVNGTE VNSNKLTIPA
AGATAKDVST PVEVVVGQEL TDEQARELID TSSLAHANIH YTATWAPAPS LGDTNATIKL
TFDDEYASGK KTYLNVVTKD NSIKVVPTAN DADKYEPSYN PIGGRPGQTV TTDVHYTPTL
PDSVKPTYKL GDNAPAGAEV DPNIGKVSYT IPSGSDTGVV TIPVTITYPD NTAERPSVDH
ATATVVVVKP QNVTKPSDPT NNTYKPSDGI HNPNNLPEGT TITWRDNGTD PKPFPDKPET
QVIKVTVPGK NNQPGTTVYV PVTVGIPGDT EIIYGTNTTT SYTIGTYTAH KTTDGSVENI
PVPAITEITF KNEDSEWNAT DWVTYKLEGN TYKITEKHGN PTLNNGASAP ESFSANDVTT
KWMENREPNT NVANYGDKTG SSLASQQTNS STDQRTGEGD NLPGNSKTRA TIHLTGTAKE
IFGSDPNWIN VFGNIYGATT GATETYKQGQ DISGISQDAF RKLINVTDLG QAGWNGQNIN
PNAPQVLAYI EGTDNSRQFA MTWAPNGMPS TRDIQNNVTG TVRISFNDGT YLDVKANINV
VADSNTDKPD DQKTSFSQRI SYQFNGQEVA SHTIADIAKG SSLTADQLKS AIDGNLPNNY
SIADGYTYPA AENNINSQPA EIIVPLKQSQ KQHDDSDYNA QVIVKYVDST NNAPLKTKNG
KDELTFDFNK KEGLKASTLK ANIDNNIPAG WKIAEGFTYP GDQTDNNTIT VKLVKNTVTP
GEPGVTPDNP EYKDLFTTST RTINVYKTDN SAIDHTEKQT ITFGRTGVLD QYTGKIMEGS
EGTWYVYNTT TNKLTSDKTG TWAEYTDIAT APQGYDYMID GVKTTEAKVA AESSVGPNTV
KMIDVKYVAQ DSTPVPYDPS NKDMNMDVTR TIKYDVSGTG HAAIADQTQT VHYVRKDANG
NAGYYNPVTG KTTWVAWTPE AGSAEFSAKN VEQISGFDSY VNGEKGTQAP VATITTKEID
GYATPQNGKT VTVTYKAVSP TEESFTQAIK YVDEKGQELA TTADAFTGTF PSDNPATVSA
EEIKNQINND LKNNSALKGW VVAGNYPVAE TITEKNPAAL TVTLKHGTKS VTPTTPGVTP
TEPKYKDMFT SVSRDIYQTK PGEEEQLIST QTVNFGRNGV EDLVTGEVTG TGAWEVGKIE
NNKFVLGGEA EYPTAAVEQI SGYDSYVNGT KATKVQSASA IKDGTPVNGE AIHITYQQSE
TPVADVTVSY QFYDTIDKKN VGNPIVVSGK PGTNAKTNLT IPVGYKLAAD QTLPENVIIP
TKDEAVVINL VHATKDVTPT TPGVNPTEPK YKDMFTSVSR DIYQTKPGEE EQLISTQTVN
FGRNGVEDLV TGEVTGTGAW EVGKIENNKF ILGGEAEYPT AAVEQISGYD SYVNGTKATE
VQSASAIKDG TPVNGEAVHI TYQKSSTVTP YDPNNKDMNK DVVRTITVNK IDGTTETIVQ
TVHFVRGGEG ENVEADTPWA VGVRDGNTWK STGATEGTWP EYNVPQVTDY TSTVDGRDAK
VVLADKNVNA NTPNTNVVVA YTKTTTPTDA DKYTPEGQDV HTTPGVVPPA EKGIKNKDDL
PKGTKYTWEK TPDVTEPGKT TGTVIVTYPD GSKDKVDVPV IIDNPTTPTD ADKYTPEGQD
VHTTPGVVPP AEKGIKNKDD MPKGTKYTWE KTPDVTKPGK TTGTVIVTYP DGSKDKVNVT
VIIGTNHVTP EPQPIHTTPG VVPNPSEGIK NKDDMPEGTK YTWKEVPDIS TIGEHTGVVT
VTYPDGSSVD VTVKVYVDAT GTSDNNSGKT TETNSEANTA KAATVNENHH AEKNTLPQTG
AKSENTAGIL GLAIATVGSL FGLGVDRKKR QK
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