7 homologs were found in PanDaTox collection
for query gene Ksed_07080 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_07080  tRNA-Leu  100 
 
 
75 bp  149  1.0000000000000001e-34  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_R0050  tRNA-Leu  87.69 
 
 
77 bp  58  0.0000003  Nakamurella multipartita DSM 44233  Bacteria  normal  0.858981  normal  0.692248 
 
 
-
 
NC_013757  Gobs_R0018  tRNA-Leu  92.31 
 
 
77 bp  54  0.000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.44419  n/a   
 
 
-
 
NC_012803  Mlut_05020  tRNA-Leu  90 
 
 
74 bp  48.1  0.0003  Micrococcus luteus NCTC 2665  Bacteria  normal  0.0450088  n/a   
 
 
-
 
NC_013521  Sked_07920  tRNA-Leu  90 
 
 
77 bp  48.1  0.0003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0780487  normal  0.280122 
 
 
-
 
NC_013159  Svir_32170  tRNA-Leu  96.3 
 
 
77 bp  46.1  0.001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.933066  normal  0.161534 
 
 
-
 
NC_013169  Ksed_06170  tRNA-Asp  100 
 
 
74 bp  44.1  0.004  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.58434  normal 
 
 
-
 
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