8 homologs were found in PanDaTox collection
for query gene Hoch_6010 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013440  Hoch_6010  type IV pilus assembly PilZ  100 
 
 
138 aa  278  2e-74  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0040  response regulator  31.11 
 
 
239 aa  46.6  0.0001  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000155004  n/a   
 
 
-
 
NC_007498  Pcar_1964  response regulator CheY  25.42 
 
 
244 aa  45.4  0.0002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0118313  n/a   
 
 
-
 
NC_007517  Gmet_3439  hypothetical protein  31.33 
 
 
107 aa  44.7  0.0004  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_1523  2-alkenal reductase  34.12 
 
 
759 aa  42.7  0.002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.250515  normal 
 
 
-
 
NC_007760  Adeh_0130  hypothetical protein  37.35 
 
 
175 aa  41.6  0.004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00621734  n/a   
 
 
-
 
NC_011145  AnaeK_2331  2-alkenal reductase  36.59 
 
 
778 aa  41.2  0.005  Anaeromyxobacter sp. K  Bacteria  normal  0.0761037  n/a   
 
 
-
 
NC_011891  A2cp1_2419  2-alkenal reductase  36.59 
 
 
771 aa  41.2  0.005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0536577  n/a   
 
 
-
 
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