9 homologs were found in PanDaTox collection
for query gene Haur_4946 on replicon NC_009972
Organism: Herpetosiphon aurantiacus ATCC 23779



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009972  Haur_4946  xylose isomerase domain-containing protein  100 
 
 
272 aa  556  1e-157  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1229  xylose isomerase domain-containing protein  49.81 
 
 
278 aa  260  2e-68  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2692  xylose isomerase domain-containing protein  45.72 
 
 
284 aa  237  1e-61  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0983  hypothetical protein  24.79 
 
 
245 aa  61.6  0.00000001  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.00469912  n/a   
 
 
-
 
NC_009523  RoseRS_1458  xylose isomerase domain-containing protein  27.35 
 
 
255 aa  45.4  0.001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.931629 
 
 
-
 
NC_012918  GM21_0531  Xylose isomerase domain protein TIM barrel  31.96 
 
 
258 aa  42.7  0.006  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008010  Dgeo_2375  xylose isomerase-like TIM barrel  29.27 
 
 
477 aa  42.4  0.009  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0511  Xylose isomerase domain protein TIM barrel  29.79 
 
 
258 aa  42.4  0.009  Geobacter bemidjiensis Bem  Bacteria  normal  0.717082  n/a   
 
 
-
 
NC_010571  Oter_4163  xylose isomerase domain-containing protein  29.09 
 
 
257 aa  42  0.01  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
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