Gene CPF_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0983 
Symbol 
ID4203843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1133107 
End bp1133844 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content25% 
IMG OID638081865 
Producthypothetical protein 
Protein accessionYP_695430 
Protein GI110800001 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00469912 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACAGT TAGGTTGTTT AGCACGATTT TTCAATAGAT ATAAGGATGA ATTTAAATTT 
GCAAAAGAAA ATAATTTTGA CTTTATGCAA TTATGGTATG ACAATAGGGG ATTATGCTTA
CATGAAGATG ATAAAGATTT TATTAACACT ATAAATAAAT ATAACTTTCC TACTATTATT
CATGCCGTTT TAAACATAAA TGAATTTGAA GAGCACATAC CCAAACTATT AGATATCCTA
AATAAATTAA ATCACAAAGA ACTAATAATC CATCCAATAT GTGAAAATGA AGATATAGAC
GAAGAAACCT TAAACAAATT AAACCTAAAT ATTAAATACG CTTTAAATAT ACTTAAACCA
CATGGAATTA ATCTTTTTCT AGAAAACAAT AGTAAACTTG ATCCAATTTT TACAACTACT
GATGAAATTC AAAAGATATT TAGCCAAAAT GCTGATTTAG AATTCTTATT AGATATTGCT
CATATAGATA ATATTAATCA CTTACAAGAT CTAATTAATA TTAAATATCC TAAAATTCTT
CATATTGCAG ATAGACATTT TGATGTTATT CATGAGCATT TACCTATAGG ACATGGAGAA
ATAGACTTCC AGCATATATT TAGTAAGCTG TTGCCTCAAT ATAATGGAAA AATAATATTA
GAAATAGTAA ATAAAGATTC AGATATAATA AACTCTAAGA ATTTAATCCA AAACTTTCTT
AATACACCAA ATAAATAA
 
Protein sequence
MPQLGCLARF FNRYKDEFKF AKENNFDFMQ LWYDNRGLCL HEDDKDFINT INKYNFPTII 
HAVLNINEFE EHIPKLLDIL NKLNHKELII HPICENEDID EETLNKLNLN IKYALNILKP
HGINLFLENN SKLDPIFTTT DEIQKIFSQN ADLEFLLDIA HIDNINHLQD LINIKYPKIL
HIADRHFDVI HEHLPIGHGE IDFQHIFSKL LPQYNGKIIL EIVNKDSDII NSKNLIQNFL
NTPNK