8 homologs were found in PanDaTox collection
for query gene HY04AAS1_1059 on replicon NC_011126
Organism: Hydrogenobaculum sp. Y04AAS1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011126  HY04AAS1_1059  ferredoxin  100 
 
 
77 aa  160  7e-39  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000317828  n/a   
 
 
-
 
NC_011126  HY04AAS1_0039  ferredoxin  72.46 
 
 
74 aa  107  8.000000000000001e-23  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  0.294704  n/a   
 
 
-
 
NC_010424  Daud_1963  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  45.16 
 
 
64 aa  55.5  0.0000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0038  putative glutamate synthase (NADPH) small subunit  40.91 
 
 
578 aa  42.7  0.001  Chlorobium luteolum DSM 273  Bacteria  normal  0.093726  normal  0.0842207 
 
 
-
 
NC_011059  Paes_0031  putative glutamate synthase (NADPH) small subunit  40.91 
 
 
578 aa  43.1  0.001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.43195 
 
 
-
 
NC_007514  Cag_1954  putative glutamate synthase (NADPH) small subunit  40.91 
 
 
579 aa  41.6  0.003  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.151886  n/a   
 
 
-
 
NC_010803  Clim_0696  putative glutamate synthase (NADPH) small subunit  40.91 
 
 
577 aa  42  0.003  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2319  putative glutamate synthase (NADPH) small subunit  35 
 
 
578 aa  42  0.003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  unclonable  0.00000648814  n/a   
 
 
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