| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0696 |
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| Symbol | |
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| ID | 6354310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 771095 |
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| End bp | 772828 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642668323 |
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| Product | putative glutamate synthase (NADPH) small subunit |
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| Protein accession | YP_001942758 |
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| Protein GI | 189346229 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGAAT CAAACCCTAT TCTCGATTAC GCGACAAACT ACCGGTTCCC GGAATTCAGC
GAGCTCGAGG GAACCGACAA GATTGTGGCT TTCGGAGACA GCAGTCACAA GTGCCCGATC
TATGTCCGTC AGGTTCCGCC CTGTACGGCG GAGTGCCCTG CGGGAGAGGA TATCAGGGGC
TATCACCGGT TTCTGAACGG AACCGACAAG TCTGACGACG CATGGAAGTC GGCCTGGGAG
ACTATCGTCA ACGTCAACCC TTTTCCTGCC GTTATGGGCA GGATCTGTCC GCATCCCTGC
CAGAAGGCGT GCAATCGTCA GTACCATGAC GAAAGCGTGG CCATCAATGC CGTTGAACAG
GCGATAGGCA ACTATGGCAT CGAGGCGGGG CTGAAGCTTC CGGCTGCCGG TACCGACACG
GGAAAACGTG TTGCCGTCAT CGGCGGCGGT CCTGCCGGGC TATCGGCGGC CTACCAGCTT
CGCCGGAGAG GACATGCCGT TACGATTTAC GATGCCAACG AGAAACTCGG CGGGATGGTG
CTTTACGGCA TCATGGGTTA CCGGGTTGAC CGCAAGGTGT TGGAAACTGA AATTCAGCGT
ATCATCGATC TTGGCGTGGA GACGAAAATG GGCGTGCGCA TCGGAGAGGA TGTCACGCTC
GAACAGCTTG AAAAGGAGTA TGACGCTGTA TTTATCGGCG TCGGTGCCCA GGTTGGGCGC
GCTCTTCCGG TTACAGGTTT CGATACCATA CCGGGGGTGA CCAATGCTAT TGACTTTCTG
CGCAACTATG AGGTGCTGGG CGACGATATT CCGGTCGGAA AAAAAGTCAT CGTCATCGGT
GACGGTAATG TAGCCATGGA CGTAGCCCGT CTTGCCCTGC GTCTCGGTTC CGAGGCCGTG
GTGATTTCCG GTGTGCCGAG AGAAGAGATG GCCTGTTTTC AGAATGAATT CGACGATGCT
GAGCGGGAAG GAACGGTTAT GCACTACCTT GCCGGTGCTG TTGAGCTCAT CGGTTCCGAG
TCGGGCCTCA GGGGTCTTCT CTGTTCAAGG ATGGTCAGGA AGGAGAAAGG CGAAGAGGGG
TGGAATTCTC CCATTCCGTT CTTCCGTTAC AGGAGTTCCG ACGAGACTTT CGGGATAGAC
GGGGACATGG TTGTGGCTTC CATAGGTCAG ACAACCGATA TGCAGGGTTT CGAGAGCATT
ACCGGAGGTC GTCCGTGGCT GAAGGTCGAT CGTCATTTCC GCATTTCAGG CAAGGAAAAT
GTTTTCGGAG GCGGAGACGC CATCAAGGTC GATCTCATCA CGACTGCGGT CGGTCACGGT
CGCAAGGCGG CAGAGTCGAT CGACGCGTTT CTCAAGGGAG AGCCGCTGCC CGAGCAGGGA
TACCGCGAAG TGACGAAAGT GCAGAAGCAG GATGTTCTTT ACTTTTTTCA TTCCGATCAG
GCCGAGCGCG AGAACATCGA ACTCGAAGAG GTTGTGGGGA ATCACGACGA ACTGCTTCAG
GCGCTCTCGA AAGAGGAGGC CCAGGCCGAA TCCGCTCGCT GCATGAGCTG CGGGCTCTGT
TTCGACTGCA AGCAGTGTGT CTCTTTCTGC CCTCAGGAAG CGGTTACCCG GTTAAGGGAC
AACCCTCCCG GAGAGGTGGT TTATACGAAT TATTCCAGAT GCGTCGGCTG CCACATCTGT
TCGCTCGTAT GTCCTTCGGG CTACATCCAG ATGGGCATGG GGGATGGATT GTAA
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| Protein sequence | MVESNPILDY ATNYRFPEFS ELEGTDKIVA FGDSSHKCPI YVRQVPPCTA ECPAGEDIRG
YHRFLNGTDK SDDAWKSAWE TIVNVNPFPA VMGRICPHPC QKACNRQYHD ESVAINAVEQ
AIGNYGIEAG LKLPAAGTDT GKRVAVIGGG PAGLSAAYQL RRRGHAVTIY DANEKLGGMV
LYGIMGYRVD RKVLETEIQR IIDLGVETKM GVRIGEDVTL EQLEKEYDAV FIGVGAQVGR
ALPVTGFDTI PGVTNAIDFL RNYEVLGDDI PVGKKVIVIG DGNVAMDVAR LALRLGSEAV
VISGVPREEM ACFQNEFDDA EREGTVMHYL AGAVELIGSE SGLRGLLCSR MVRKEKGEEG
WNSPIPFFRY RSSDETFGID GDMVVASIGQ TTDMQGFESI TGGRPWLKVD RHFRISGKEN
VFGGGDAIKV DLITTAVGHG RKAAESIDAF LKGEPLPEQG YREVTKVQKQ DVLYFFHSDQ
AERENIELEE VVGNHDELLQ ALSKEEAQAE SARCMSCGLC FDCKQCVSFC PQEAVTRLRD
NPPGEVVYTN YSRCVGCHIC SLVCPSGYIQ MGMGDGL
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